Detail information of Asa5G05604


Location
GeneChrStartEndStrand
Asa5G05604chr515129683261512974750+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247678.17.8e-55protein PHOSPHATE STARVATION RESPONSE 2-like
SwissprotB8B5N8.19.9e-47Protein PHOSPHATE STARVATION RESPONSE 2
trEMBLA0A5P1E5S55.6e-55HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G28610.155.952e-61 232AtPHR1;PHR1phosphate starvation response 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag296699.t1; g58682.t1; g58683.t1
Allium fistulosumAfisC3G04054; AfisC4G06593
Allium sativumAsa0G01185.1; Asa0G01186.1; Asa1G03501.1; Asa2G00052.1; Asa2G03139.1; Asa5G05604.1; Asa7G04199.1; Asa8G02747.1; Asa8G02748.1
Arabidopsis thalianaAT3G04450.1; AT3G04450.2; AT4G28610.1; AT5G29000.1; AT5G29000.2; AT5G29000.3; AT5G29000.4
Oryza sativaLOC_Os03g21240.1; LOC_Os07g25710.1; LOC_Os07g25710.2; LOC_Os07g25710.3; LOC_Os07g25710.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain8013142.35.4e-11
PF14379.3Myb_CC_LHEQLEFamily16321089.66.7e-26

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14317NUP214, CAN; nuclear pore complex protein Nup214EC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.