Detail information of Asa5G05616


Location
GeneChrStartEndStrand
Asa5G05616chr515192291821519230466-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263794.12.8e-61myb-related protein Myb4-like
SwissprotQ7XBH4.26.0e-56Transcription factor RLTR1
trEMBLA0A2C9UD025.0e-60Myb-related protein Myb4-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G23250.151.075e-57 217ATMYB15;ATY19;MYB15myb domain protein 15

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag193050.t1; g193052.t1
Allium fistulosumAfisC4G06640
Allium sativumAsa5G05616.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain156257.31.1e-15
PF00249.28Myb_DNA-bindingDomain6811348.46.9e-13

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.