Detail information of Asa5G06023
| Gene | Chr | Start | End | Strand |
|---|
| Asa5G06023 | chr5 | 1640648172 | 1640655948 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020242367.1 | 1.0e-206 | CHD3-type chromatin-remodeling factor PICKLE |
| Swissprot | Q9S775.1 | 4.5e-167 | Protein GYMNOS |
| trEMBL | A0A6P8BRW8 | 4.8e-174 | CHD3-type chromatin-remodeling factor PICKLE |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G25170.1 | 60.17 | 8e-167 | 583 | CHD3;CHR6;CKH2;EPP1;GYM;PKL;SSL2 | chromatin remodeling factor CHD3 (PICKLE) |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa5G06023 | AT2G25170.1 | 482 | 176 | 3 | 1 | 481 | 1 | 467 | 60.17 | 8e-167 | 583 |
| Asa5G06023 | AT4G31900.1 | 397 | 151 | 8 | 91 | 481 | 36 | 401 | 52.64 | 2e-112 | 402 |
| Asa5G06023 | AT4G31900.2 | 302 | 109 | 4 | 180 | 481 | 88 | 360 | 54.30 | 1e-89 | 327 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00628.26 | PHD | Domain | 56 | 98 | 33.4 | 2.9e-08 |
| PF00385.21 | Chromo | Domain | 103 | 157 | 39.2 | 4.1e-10 |
| PF00385.21 | Chromo | Domain | 195 | 241 | 46.4 | 2.4e-12 |
| PF00176.20 | SNF2_N | Family | 308 | 479 | 126.1 | 1.2e-36 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K11643 | CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 | EC:3.6.4.12 | - | - |