result

Gene information

Detail information of Asa5G06119

Location

Gene	Chr	Start	End	Strand
Asa5G06119	chr5	1687434890	1687436749	-

Sequences

CDS

>Asa5G06119.1
ATGCCATCCTCCTCCGCCATCCTCCGAAGCCTAATCCTTACCCTTATCCTAACTCCAACAATAATAATCGCCGCGGTCGCCGAAGACGACGTGACCTGCCTCCGCCAGTTCAAATCCTCGGTTTCCGATCCCGATTCCAAACTCTCATCCTGGACCTTCTCCCCTTCCTCCCCCGTTGGATTTATCTGCAGCTTCACTGGAGTCTCCTGCTGGAACCTGCAAGAAAACCGTGTTGTCTCCCTTAGTCTCTCCTCCTCGTCCCTCTCCGGCCAGATCCCATCCTCCCTTGAGCTCTGCTCCTCCATTAACACCCTTGACCTGTCGCACAATTCGCTTTCCGGCCCACTCCCCTCCTCCCTATGCGCCTGGATCCCATATTTAGTCAATCTCGACCTTTCCTATAACTCTTTTAGTGGCCCTATTCCTACCAACCTTTCTGACTGCAAATTCTTAAATTCACTAGATTTGTCCAACAACATGCTCTCCGGAGACATTCCTCCTGTATTGGGAAGCCTGAGCAGGCTCAAGAAGCTGGATCTCAGCTCCAATGATCTAAGAGGCCAGATTCCTTCTGATCTGGTTTCAAAGTTTGATTCTTCATGCTTTGAAGGCAACAAGGATTTGTGCAGTGAATCAGGATGCAGTAAGTCTGGATCTAAAAGCGTTATCATCATTGTGGTAGCTGGTGTTTTCGGAGCCTTGGTTTCGCTGGCTATAGCATATATGGTTTACCGGCTTTGCTTTGCAAAAAAAAGTATATTAAAGAAAAGTGCTGGGATAGGAGGAGGAGAAGAAGGAAGTTGGTGGTCGGATAGGTTAAGAACTTCACATAACAGACTATTGCCTGTTTCACTTTTTCAAAAGCCAATTGTTAAGGTGAAGGTTGCAGATTTAATGGCAGCTACTAATGACTTTCGACCAGAGAACATGGTGGTAGCTGGAAGTTCTAGGGTTGGAACTTCTTACAAAGCAGTTTTGCCAGATGGGTCAGGATTGATGGTGAAAAGATTGCATGAGTGCAGGATTCCAGAGAAGCAGTTTAAAGTTGAGGTTGGAAAGATCGGACAAGTAAGGCATCCGAATCTTGTACCATTGCTAGGCTACTGCGTTGTGGAAGACGAGAGGTTGTTGATTTACAAGGATATGGCAAATGGCGCGCTTTCCAAGTTGCTGCATGCTAAGGATTCAAATCTTGATTGGAAAACAAGGTTGAAGATTGGGATCGGTGGAGCAAGAGGGCTTGCTTGGCTTCACCATGGCTATCAAGTTCCTAACCTGCATAGGAATGTAAGCTCTAGCGCCATACTTCTTGACGAAGAGTACGAACCAAGGATAATAGATTTCGGTGTTGCTAGATTGCTTAGACCGGTTATTGATGACGACGGTTCGAACAATACAAGCCCTTTTTTGAATGGGGATGTTGGAGAGTTTGGTTATGTTGCTCCTGAATATGCTACTCATCCTGTGCCTTCTGTTAAAGGAGATGTGTATGGCTTTGGTGTTGTGTTGCTCGAGCTAGCTACTGGCCAAAAGGCTGTGGAAGTTGGTAATGATTTGGCTGGCGATGGTTTTAAGGGTAACTTGGTGGATTGGGTCACTCAACTCTGTAATGTAGGACAAATTGGGGAGGCCATTGATAGGTCCTTAAAAGGTAATGGACATGATAACGACATTGTTGAGTTTATGAAGATCGCTTGCGGGTGTGTTGTTGCTCGGCCTCATGAGAGGTATTCTATGTACAAAGTTTATCACTTGTTGAAAAGCATTGGTGGAGGTGAGTTCGAGAACACGGAACAGTTTGATGAATTCCAACTTGTCTATGGAAAGGATAAAGATGAGTTGGAGGCCAACACTGCTTAG

Protein

Gene

>Asa5G06119.1
ATGCCATCCTCCTCCGCCATCCTCCGAAGCCTAATCCTTACCCTTATCCTAACTCCAACAATAATAATCGCCGCGGTCGCCGAAGACGACGTGACCTGCCTCCGCCAGTTCAAATCCTCGGTTTCCGATCCCGATTCCAAACTCTCATCCTGGACCTTCTCCCCTTCCTCCCCCGTTGGATTTATCTGCAGCTTCACTGGAGTCTCCTGCTGGAACCTGCAAGAAAACCGTGTTGTCTCCCTTAGTCTCTCCTCCTCGTCCCTCTCCGGCCAGATCCCATCCTCCCTTGAGCTCTGCTCCTCCATTAACACCCTTGACCTGTCGCACAATTCGCTTTCCGGCCCACTCCCCTCCTCCCTATGCGCCTGGATCCCATATTTAGTCAATCTCGACCTTTCCTATAACTCTTTTAGTGGCCCTATTCCTACCAACCTTTCTGACTGCAAATTCTTAAATTCACTAGATTTGTCCAACAACATGCTCTCCGGAGACATTCCTCCTGTATTGGGAAGCCTGAGCAGGCTCAAGAAGCTGGATCTCAGCTCCAATGATCTAAGAGGCCAGATTCCTTCTGATCTGGTTTCAAAGTTTGATTCTTCATGCTTTGAAGGCAACAAGGATTTGTGCAGTGAATCAGGATGCAGTAAGTCTGGATCTAAAAGCGTTATCATCATTGTGGTAGCTGGTGTTTTCGGAGCCTTGGTTTCGCTGGCTATAGCATATATGGTTTACCGGCTTTGCTTTGCAAAAAAAAGTATATTAAAGAAAAGTGCTGggataggaggaggagaagaaggaagtTGGTGGTCGGATAGGTTAAGAACTTCACATAACAGACTATTGCCTGTTTCACTTTTTCAAAAGCCAATTGTTAAGGTGAAGGTTGCAGATTTAATGGCAGCTACTAATGACTTTCGACCAGAGAACATGGTGGTAGCTGGAAGTTCTAGGGTTGGAACTTCTTACAAAGCAGTTTTGCCAGATGGGTCAGGATTGATGGTGAAAAGATTGCATGAGTGCAGGATTCCAGAGAAGCAGTTTAAAGTTGAGGTTGGAAAGATCGGACAAGTAAGGCATCCGAATCTTGTACCATTGCTAGGCTACTGCGTTGTGGAAGACGAGAGGTTGTTGATTTACAAGGATATGGCAAATGGCGCGCTTTCCAAGTTGCTGCATGCTAAGGATTCAAATCTTGATTGGAAAACAAGGTTGAAGATTGGGATCGGTGGAGCAAGAGGGCTTGCTTGGCTTCACCATGGCTATCAAGTTCCTAACCTGCATAGGAATGTAAGCTCTAGCGCCATACTTCTTGACGAAGAGTACGAACCAAGGATAATAGATTTCGGTGTTGCTAGATTGCTTAGACCGGTTATTGATGACGACGGTTCGAACAATACAAGCCCTTTTTTGAATGGGGATGTTGGAGAGTTTGGTTATGTTGCTCCTGAATATGCTACTCATCCTGTGCCTTCTGTTAAAGGAGATGTGTATGGCTTTGGTGTTGTGTTGCTCGAGCTAGCTACTGGCCAAAAGGCTGTGGAAGTTGGTAATGATTTGGCTGGCGATGGTTTTAAGGGTAACTTGGTGGATTGGGTCACTCAACTCTGTAATGTAGGACAAATTGGGGAGGCCATTGATAGGTCCTTAAAAGGTAATGGACATGATAACGACATTGTTGAGTTTATGAAGATCGCTTGCGGGTGTGTTGTTGCTCGGCCTCATGAGAGGTATTCTATGTACAAAGTTTATCACTTGTTGAAAAGCATTGGTGGAGGTGAGTTCGAGAACACGGAACAGTTTGATGAATTCCAACTTGTCTATGGAAAGGATAAAGATGAGTTGGAGGCCAACACTGCTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008800372.1	1.3e-155	inactive LRR receptor-like serine/threonine-protein kinase BIR2
Swissprot	O04567.1	1.4e-120	Probable inactive receptor kinase At1g27190
trEMBL	A0A8B7CJB5	9.7e-156	inactive LRR receptor-like serine/threonine-protein kinase BIR2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G28450.1	49.66	4e-166	581		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G06119	AT3G28450.1	596	277	9	23	613	26	603	49.66	4e-166	581
Asa5G06119	AT1G27190.1	611	274	10	7	611	4	600	51.88	1e-165	580
Asa5G06119	AT1G69990.1	604	283	11	13	611	4	588	49.17	4e-158	555

Ortholog group

Species	Genes
Allium cepa	g120766.t1
Allium fistulosum	AfisC2G06909
Allium sativum	Asa5G06119.1
Arabidopsis thaliana	AT1G27190.1; AT1G69990.1; AT3G28450.1
Oryza sativa	LOC_Os04g41030.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	27	71	37.9	1.4e-09
PF13855.3	LRR_8	Repeat	125	185	28.7	7.2e-07
PF07714.14	Pkinase_Tyr	Domain	333	582	82.7	2.3e-23

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network