result

Gene information

Detail information of Asa6G00013

Location

Gene	Chr	Start	End	Strand
Asa6G00013	chr6	4473522	4474541	-

Sequences

CDS

>Asa6G00013.1
ATGCAGCACGTCTCTGGATTGCTTGCCGGCGCTGTGGCTGCTATCATGTGTTTAATACATGGAAGGACAAAACTAAACAGGGCAAGGGAGACATGTTTCAAACAAAATGGAGGGTTGTTTCTTCAAGCACAGATTAATGCACATCAGTCTGTCCGGTTTAGGATACTTTCCATAAAAAACACCTTAAAGGCAACAAACAATTTCGATGAAGGTAACATTAAAGGACGTGGAGGTCAGGGCACTGTTTACGAAGGACTCATTGACAACAGACACGTAGCTATAAAAAAGGCAGTCGTGATCAATGAAAAGAGGATGAAGGAATTCGTTAAAGAAATGTATATACTATCTCTCATCAACCATAAAAGCATAGCCCAAATTTTGGGGTGTTGTTTGGAAGTTGAAGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGAGGTACACTATACCAACGTATTCAACAAAAGAATCAAAGCATGTCATTGGGATTTCGCCTTCAGATCGCAATTGACTGTGCTTCCGCTCTCACTTACTTACATTATTATGCTTTGCCCCCAACCATTCATGGGGATATTAAATCTTCAAACATTCTACTAGACGAGAATAATATTGCAAAAATATCAGATTTTGGAGCTTCAATGTTACCCCTAATGGAAATAAATGAAACAGGCGTACCCGATACTTACGGCTACTTAGATCCCGAGAGTTTATTAACAGCTCAACTGACCAAAAAAAGCGACGTGTATAGTTTTGCAGTTGTCTTTTCAGAGCTTTTAACTAGAATGAAAGCAGTGTATTTTAATGAGCTCAGAGAAAAAGAATACCTTGTGGGAACGTTCAAAGAAGAAGGTTTCGAACGGATTTTAGACGATGAAATCAGGCATGTGATGAAAAAAGAACAAATAACTGAATTTTTAGAGCTTTTGAGCAACTGTCTAGAGGAAAATGCGAGTGAAAGACCAACAATGAAAAATGTCTTGGCTTGGCTTCAAAGGATACAAGAGTTTGATCCAAAATTTTAG

Protein

Gene

>Asa6G00013.1
ATGCAGCACGTCTCTGGATTGCTTGCCGGCGCTGTGGCTGCTATCATGTGTTTAATACATGGAAGGACAAAACTAAACAGGGCAAGGGAGACATGTTTCAAACAAAATGGAGGGTTGTTTCTTCAAGCACAGATTAATGCACATCAGTCTGTCCGGTTTAGGATACTTTCCATAAAAAACACCTTAAAGGCAACAAACAATTTCGATGAAGGTAACATTAAAGGACGTGGAGGTCAGGGCACTGTTTACGAAGGACTCATTGACAACAGACACGTAGCTATAAAAAAGGCAGTCGTGATCAATGAAAAGAGGATGAAGGAATTCGTTAAAGAAATGTATATACTATCTCTCATCAACCATAAAAGCATAGCCCAAATTTTGGGGTGTTGTTTGGAAGTTGAAGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGAGGTACACTATACCAACGTATTCAACAAAAGAATCAAAGCATGTCATTGGGATTTCGCCTTCAGATCGCAATTGACTGTGCTTCCGCTCTCACTTACTTACATTATTATGCTTTGCCCCCAACCATTCATGGGGATATTAAATCTTCAAACATTCTACTAGACGAGAATAATATtgcaaaaatatcagattttggagCTTCAATGTTACCcctaatggaaataaatgaaacagGCGTACCCGATACTTACGGCTACTTAGATCCCGAGAGTTTATTAACAGCTCAACTGACCAAAAAAAGCGACGTGTATAGTTTTGCAGTTGTCTTTTCAGAGCTTTTAACTAGAATGAAAGCAGTGTATTTTAATGAGCTCAGAGAAAAAGAATACCTTGTGGGAACGTTCAAAGAAGAAGGTTTCGAACGGATTTTAGACGATGAAATCAGGCATGTGATGAAAAAAGAACAAATAACTGAATTTTTAGAGCTTTTGAGCAACTGTCTAGAGGAAAATGCGAGTGAAAGACCAACAATGAAAAATGTCTTGGCTTGGCTTCAAAGGATACAAGAGTTTGATCCAAAATTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026657217.1	2.9e-75	LOW QUALITY PROTEIN: putative wall-associated receptor kinase-like 16, partial
Swissprot	Q9LMN8.2	2.7e-62	Wall-associated receptor kinase 3
trEMBL	A0A8K0IKQ5	9.3e-76	Putative Wall-associated receptor kinase 3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G19390.1	44.87	2e-66	249		Wall-associated kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G00013	AT1G19390.1	312	160	6	33	332	414	725	44.87	2e-66	249
Asa6G00013	AT4G31100.1	310	159	5	36	332	410	719	44.52	3e-66	249
Asa6G00013	AT1G17910.1	338	185	7	7	332	392	728	41.42	1e-65	246

Ortholog group

Species	Genes
Allium cepa	g450069.t1
Allium fistulosum	AfisC1G08215; AfisC1G08221; AfisC4G03052; AfisC8G01761; AfisS72G00001
Allium sativum	Asa0G04436.1; Asa0G04437.1; Asa5G03353.1; Asa6G00013.1; Asa6G00014.1; Asa6G00015.1; Asa6G01753.1; Asa6G01754.1; Asa7G00276.1; Asa7G06624.1; Asa7G06630.1
Arabidopsis thaliana	AT1G22720.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	75	326	138.7	1.8e-40

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network