Detail information of Asa6G00222


Location
GeneChrStartEndStrand
Asa6G00222chr67040685170415562+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK78756.11.1e-140uncharacterized protein A4U43_C02F22090
SwissprotQ949N0.11.9e-49Protein NTM1-like 4
trEMBLA0A5P1FKB07.8e-141NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G10480.149.732e-50 198ANAC050;NAC050NAC domain containing protein 50

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag130589.t1
Allium fistulosumAfisC8G05733
Allium sativumAsa6G00222.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily1214082.33.1e-23
PF02365.12NAMFamily21434583.71.1e-23
PF05641.9AgenetDomain48053934.32.2e-08
PF05266.11DUF724Family797927139.69.4e-41

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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