Detail information of Asa6G00447
| Gene | Chr | Start | End | Strand |
|---|
| Asa6G00447 | chr6 | 118905781 | 118918402 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | MQL72789.1 | 4.7e-97 | hypothetical protein |
| Swissprot | Q42877.1 | 6.1e-94 | DNA-directed RNA polymerase II 135 kDa polypeptide |
| trEMBL | A0A1D1YAY8 | 3.4e-97 | DNA-directed RNA polymerase subunit beta |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G21710.1 | 91.06 | 2e-97 | 352 | EMB1989;NRPB2;RPB2 | DNA-directed RNA polymerase family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa6G00447 | AT4G21710.1 | 179 | 16 | 0 | 71 | 249 | 412 | 590 | 91.06 | 2e-97 | 352 |
| Asa6G00447 | AT5G45140.1 | 158 | 103 | 1 | 103 | 258 | 421 | 578 | 33.54 | 2e-25 | 113 |
| Asa6G00447 | AT3G23780.2 | 187 | 125 | 3 | 73 | 258 | 420 | 602 | 30.48 | 5e-17 | 85.5 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF04565.13 | RNA_pol_Rpb2_3 | Domain | 131 | 195 | 92.5 | 1.2e-26 |
| PF04566.10 | RNA_pol_Rpb2_4 | Domain | 230 | 258 | 34.5 | 1.7e-08 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K03010 | RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 | EC:2.7.7.6 | RNA polymerase | ko03020 |