result

Gene information

Detail information of Asa6G00461

Location

Gene	Chr	Start	End	Strand
Asa6G00461	chr6	119992167	119994047	+

Sequences

CDS

>Asa6G00461.1
ATGGCCATTTTCACCTTATTCTTCATAATCCTCTTCTTCCCCAACGTCTCATCTGCATCAAACTTTATCTCCCTCAATCGATCGCTATCAGGAAACCAAAAACTAATATCACCAAAAGGAGATTTTGAGTTGGGTTTTTTCAAACCAGGCAATTCTTCATACTACTACATCGGAATTTGGTACAGCCTCCAAACAGTACCTCAACTTACATCTGTTTGGGTCGCAAACAGAGAAACACCAATATCCGATTCATCCAAAACGTACCTGAAAATCTCTGAAGGTGGTAACTTGGTCATGTCAAACAGTTCAAACCCTCTAATTTGGTCGACAAACGTAACCGATATTGCTTCCAAAACCACCGTTGCCGTACTGTTAGATTCTGGTAATCTAGTTTTAAGAGATGGTTTGAACAGCAACAACACTCTTTGGCAAAGCTTCGATCATCCAACTCACACTTGGTTACCTGGTGGTAGGCTTGCTCTGGACAAAGTTACCAATTCGGTCATGAGATTGACTTCATGGACGAGCGACGACGACCCTGCAGCTGGGATCTTTAGCCTATCCATTGACCCTAATGGTACGAGTCAGTACTTCATATACTGGAACGACACCTTTAATTACTGGTCTAGTGGTAAATGGAACGGCCATATATTCAGTTTGGTGCCTGAAATGACTGCTAATTTTGTGTACAATTTCCAGTATGTGTCCAATGCCACGACCAACTACTTCACCTATTCTTTGAATCAGCATATCATTTCCAGGTTCATAATGGATTTAACCGGGCAGATAAAGCAGTTAACTTGGGTTGAAAATGCTAATGACTGGATTTTGTTTTGGTCTCAGCCTCGACAGCAGTGTGCAGTTCACGCCTTGTGTGGACCTTATGGGAGCTGCAACGAAAACGAGCTGCCTTACTGTAACTGCATCAAAGGTTTCAGAGAAAATTCTCTTGATAACTGGTCGTTGCACGACTACACACAAGGCTGTACACGCAACACGCCGCTTCAATGTGGTAGCAATAGTTCGGTTAAGTCGGAAAAGGATAAGTTTTACGCCATGTCCAGCACTAGGTTACCCGATAACCAGATAACCGTTGAAGGAAGTGATGAAGAGTGCCAGGAGATATGCTTGAACAACTGTTCTTGCACTGCCTATGCTTACGACGATACTAATGGTTGTTTGCATTGGTATGGGGATTTGCTCAACCTTCAAGACCAGTATAGTGGTTCAACTGGTGGAGGAACCTTGTTCCTCCGCCTCTCCGCCTCCGAACTCCCAGACTCCAAATCCAACAAGAAGGTCGTTACCGGGTCTGTAGTTGCTGGTGTTGGTGCTGTTTTGCTGATTTTGATACTTTCATGCTTGTTTATTCTGTACAAAAGAAGAAAAGTTCGATCAAAAGTAGTAGAAGGCGGTTTGGTAGCATACAGATATGGCGACCTACAGCGTATAACGAAGAACTTCTCAGAGAAGCTAGGCCAAGGAGCATTTGGGTCTGTTTTCAAAGGTACACTGACACCCAACTCAATAATAGCAGTGAAAAAACTAGAAGGGGTAGGGCAAGGGGAGAAGCAATTCAGAACAGAAGTCAGCACCATCGGAACCATCCAGCATGTGAACCTAGTTCGCCTCCATGGATTTTGCTCTGAAGGTGCTCAAAAGCTTCTGGTCTATGAGTACATGCCCAATAGCTCTCTGGACTCCCACTTATTCAATAAAAAACAGACTGTTTTAGACTGGAAAACCAGATACCAGATCGCTCTAGGAACCGCTAGGGGCCTGACATACCTGCATGAACAGTGCAGAGACTGCATTATTCACTGCGACATAAAACCCGAAAACATACTGCTGGACTCTTCATTTGTGCCTAAAGTAGCCTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	1.2e-249	uncharacterized protein LOC109834727
Swissprot	O64477.1	6.3e-174	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	5.3e-226	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	51.41	2e-176	616		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G00461	AT2G19130.1	640	284	13	4	626	7	636	51.41	2e-176	616
Asa6G00461	AT4G21380.1	668	331	20	14	626	23	668	38.92	1e-120	430
Asa6G00461	AT4G21390.1	684	351	22	2	626	8	671	37.13	3e-114	409

Ortholog group

Species	Genes
Allium cepa	g114879.t1; g223625.t1; g231660.t1; g28667.t1; g34639.t1; g376837.t1; g392474.t1; g392992.t1; g393005.t1; g450089.t1; g90119.t1
Allium fistulosum	AfisC2G09348; AfisC3G04139; AfisC3G04861; AfisC3G04880; AfisC3G04884; AfisC3G04886; AfisC3G04888; AfisC3G04889; AfisC3G04892; AfisC3G04893; AfisC3G04925; AfisC3G04926; AfisC3G05189; AfisC3G05552; AfisC3G05554; AfisC3G08934
Allium sativum	Asa0G03374.1; Asa0G05382.1; Asa2G03945.1; Asa2G03965.1; Asa2G03967.1; Asa2G04010.1; Asa2G04092.1; Asa2G04103.1; Asa2G07458.1; Asa6G00461.1; Asa7G06596.1
Arabidopsis thaliana	AT2G19130.1
Oryza sativa	LOC_Os01g06240.1; LOC_Os01g12290.1; LOC_Os01g40499.1; LOC_Os01g40499.2; LOC_Os01g45520.1; LOC_Os01g65010.1; LOC_Os01g65030.1; LOC_Os01g65060.1; LOC_Os01g66610.1; LOC_Os01g66640.1; LOC_Os01g66680.1; LOC_Os04g34250.1; LOC_Os04g34270.1; LOC_Os04g34290.1; LOC_Os04g34320.1; LOC_Os04g34330.1; LOC_Os04g34370.1; LOC_Os04g34390.1; LOC_Os04g34410.1; LOC_Os04g34420.1; LOC_Os04g42740.1; LOC_Os05g07300.1; LOC_Os05g07300.2; LOC_Os07g36780.1; LOC_Os10g20120.1; LOC_Os10g20160.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	70	176	118.3	1.3e-34
PF00954.17	S_locus_glycop	Domain	208	315	112.9	9.3e-33
PF08276.8	PAN_2	Domain	344	402	62.5	2.6e-17
PF00069.22	Pkinase	Domain	489	624	96.4	1.6e-27

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00276	AOC3, AOC2, tynA; primary-amine oxidase	EC:1.4.3.21	Glycine, serine and threonine metabolism	ko00260
			Tyrosine metabolism	ko00350
			Phenylalanine metabolism	ko00360
			beta-Alanine metabolism	ko00410
			Isoquinoline alkaloid biosynthesis	ko00950
			Tropane, piperidine and pyridine alkaloid biosynthesis	ko00960

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network