Detail information of Asa6G00496


Location
GeneChrStartEndStrand
Asa6G00496chr6128135956128139369-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260824.11.1e-220lysine-specific demethylase JMJ706-like isoform X7
SwissprotQ336N8.12.4e-191Protein JUMONJI 706
trEMBLA0A5P1F0828.1e-221JmjC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G46910.158.252e-180 629Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

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Ortholog group
SpeciesGenes
Allium cepag56166.t1
Allium fistulosumAfisC2G09027
Allium sativumAsa6G00496.1
Arabidopsis thalianaAT5G46910.1
Oryza sativaLOC_Os10g42690.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02375.14JmjNFamily578952.04.6e-14
PF02373.19JmjCDomain233356135.97.3e-40
PF02928.13zf-C5HC2Domain45450527.23.3e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11446KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylaseEC:1.14.11.67 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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