Detail information of Asa6G01060


Location
GeneChrStartEndStrand
Asa6G01060chr6284831519284833886-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246188.11.6e-97probable mediator of RNA polymerase II transcription subunit 26c
SwissprotF4KFC7.15.6e-39Probable mediator of RNA polymerase II transcription subunit 26c
trEMBLA0A5P1E7T81.1e-97TFIIS N-terminal domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G09850.141.998e-63 237Transcription elongation factor (TFIIS) family protein

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Ortholog group
SpeciesGenes
Allium cepag20871.t1; g366867.t1
Allium fistulosumAfisC2G08189; AfisC4G05299; AfisC7G05133
Allium sativumAsa6G01060.1; Asa7G06166.1
Arabidopsis thalianaAT5G09850.1
Oryza sativaLOC_Os11g06650.1; LOC_Os12g06850.1; LOC_Os12g06850.2; LOC_Os12g06850.3; LOC_Os12g06850.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08711.8Med26Domain14819750.02e-13

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15076ELOA, TCEB3; elongin-AEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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