result

Gene information

Detail information of Asa6G01143

Location

Gene	Chr	Start	End	Strand
Asa6G01143	chr6	302576262	302579706	+

Sequences

CDS

Protein

Gene

>Asa6G01143.1
ATGAGCGCAAGTTTCGACTCGTCTGACCAGTCTGGGTCGGAGTCGATATCAACCGTATCAACCCGTTCCGATCCAACGCATCCACCCGGGTCCTTCGTTAACGTGTCACTCTCCGACCTGCGCTTCGTCCACAAACTGGGCAGCGGGGACATAGGCAACGTCTACCTTGCGGAGCTGCTATCTTCCGAACATTCAAAAGGAAGGAAACCATTGGCTGCAAAAGTGATGTACAAGCAGGAGATCGTTGGCAGGAATAAAGAGGGACGGGCACGGACGGAGCGGGAAATACTGCAAATGTTGGACCATCCATTTTTACCGAAGCTTTATGGCGTTGCGGAGAGCGACGAAGTGTTCTGTCTCTTGACCGAGTTTTGTACTGGCGGCGATCTCCATGTTCTGCGGCAGAAGCAGGTTGGAAAACGGTTTACTGAAAGCGCAGTCAGGTAATTAAGGCATCTTTACCTTTGTTTATATATGGGCTATTTGAtttgttcttttttactatttgggGTTAGAGAAACTACCTTTGTATgaggtttgattgatttgaatttgaatggtctGTTTTGATGTCAGTTCTGGAATTTTCCTCACCTCACAACAGATCGCTAAACAGACGCCTCTTTTTATTTCACTGGAATGCATCGCTTTATGATTGTTTTTTGATAATTGAATTCGTCACAGAAAATAAAAGTGATCTTGTCCATCACATGCGTATTTTGCATGCCAATTTCCACATGCACATTAATTACCCCTTTCAACTTGCAGATAGGACATATACGgatggaattttcaaagtttattgtTTTTTCCTAGAATCATCTTGTCAATGTCTTCTGATCAGTTTTTATAAGGGATGTCGACAACTAACAATATCTTTGTAGTACTTAACTCAATAATGCCAATGCTTGTAAATCAATTGTGTTGTACATGCATCATCTCGGCAAAATGTGGTTTTAGCATAAGACATTGTATTATGAGCATGTTTGGAAGagaaaaaagaagagagagaagaagaaaacccATCAAAGCTACATGCAAATAAGCTATTACACCGCACCAATTGTTCTGTACTCAAATTCAGTGTCCCCCGTGTCTCATCCAATCAAAACCCTCTGATTTCTACTTTTTGCACTTAAACCCTTGAATTATTGGGTTATTTAAATGCAAAACAACGGAAATCAAAGGATCTGGTTGGAAGACACGGGGAGACAGTGAGAATGGAGATAGAAGAATTGGTCTCCTATTACAATTGGGTGTTATGAATTTCCTCCCAAGGAAATAACATAAATAGTTTGGAACTTGATTAAGAAAAAACTTTCATACATTTGATGACTCATGACAAATTTCACGAGtaactttaatcaattaaatagcagtgttgtttcaaataattaattaaccaaaaTGACACTATTTCATCTTTGTCTTTCTGGGAGGATATATCTAATTATGTTATTTGATATGCATTCTTTACCAACAAATCAATATAgtttatttctaaatataaaatacatttacCAAAATATCCATTCAGTTTGTCGGCTTGTTATTATTGAATCAATAATAGTTATGAGTTATTAAAACTTGTTTTATGGAGATGTAAAGTAAATAGTTGAACAAGCTCTACATATCAATTGGAATATACAATTTATTGAAGTAtgattttgttcacactttattTAGTAGTGTGAACAAGACATTAAGTCATTGATGGacaaaattaatataatggtcCACGCTATTAAATAACGATCATCTTCCAAAGTTTATGCATTGGATTTCAACGCAAAACAAGAAAATGACATATTGCTAAAGTTGCACAGTCTGCATATTATCAAAGTTTGCATAATACTACtatttatagtttaaattaaacatgcCGCCTCATTATATGTAAGAACATATTGAAAAAAAACATGATTTATCATGTGCTTCATTCCATATATCATGCGACTTGCATTAATTCGTACAGTTTTATAGAATTTCCTATCTTAAATCCATCATTAGCTTAAACTTAAAGTAATTTGCATGAAATTCCAGGTTCTATGCCTCCGAAGTAGTAGTATCTTTAGAGTACATGCACATGCTTGGAATCATTTATCGTGACTTGAAGCCAGAAAACGTACTGATTCAATCCGACGGTCACATTATGCTGACTGACTTCGACTTATCTCTCAAATCAGATGTTGAAAGCTCCCCAGCTGTCCAACTCATACCCAGTAGAAATAAAGTTTCTCTTCCTGCTTCGAGTATCAATTCTTCTTGCATATTGCCTAGCTGCATTGTTCCTTCAGCTTCGTGTTTTCAACGAAAATGCAAAATTCGAAAGAGCAAATTAGGGAAAAGATATGACGGTGGATTTCAGTTTGTTGCTGAACCCGTTGATTTGAGATCTATGTCGTTTGTTGGCACTCATGAATATTTGGCTCCTGAGATTGTTTCAGGTAATCACTAAAGCAAAATAatacgtacatatatacatacgcacatacatacatatgtatttatgtacGTACGTATGTATATATGTCTATGTATGTACTTATGTTTGGGACGAAGGAATTACTAAAATACTAGTGTACACTTTTGAATTATTTAGATGAAATGCCATGCTAGGTGTTTAAACCATTAGATTTTGCAAGTTTCAAAATTTGGTATATTTTGATGAATTTAGTGCACTGAAAATTTCGCTAATTTTCGTGAAATGCAGCAAACTTATTTTTAGTCATTAGATTGCAAATCTGATGGTTCCCACACTTGTAATGAATCTATACTCAGTTATTCCATCAGTGCTGACTGCTGGTAACATGCATCAGTGATTTCCTTATGAATTCTTTTGTTACACATATATCTTTTGATGGTGAATAAAAAGTGAATGATTCATGGATAAAAATATGAGGGGCTTAAATCTGGTCCCAACATTCATTACTGTATTTCAGGATGTTTTCAAAGAATTAGTTAATGTACATGGTCATAGATATACATGCATCAACATTGGAAAATTCTCATTCAGAATTTTTATTAAGGTGTACTGGTATATTTTTGAATAGGGGAAGGGCATGGAAGCGCAGTGGATTGGTGGACACTAGGCATATTCATGTACGAGCTTCTTTACGGTGTTACCCCATTCAAAGGATCCGATAACGAACTTACATTGGCCAACATTGTCGCTCGAGCCCTCGAGTTCCCTAAAGATCCACCCATATCCAACTCTACTAAAGAACTAATTGCAGGGCTACTAGCCAAGGACCCAACCAAGAGGATCGGATCCACAACGGGTGCATCCGCAATTAGAAGGCATCAATTTTTCAGCAGAGTTAACTGGGCATTGTTAAGATGTGCATCTCCTCCTTACATTCCACCTCCATTTAGCAGTAGCAGCCTCGATTCATCGGACGATGGCAGCGTACCCGGTACACCTGTAGATGTAGAATATTATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009421129.2	1.8e-132	PREDICTED: serine/threonine-protein kinase D6PK-like
Swissprot	Q9LTW5.1	3.7e-98	AGC serine/threonine-protein kinase subfamily 1 member 5
trEMBL	A0A833QND4	1.3e-132	Serine/threonine-protein kinase D6PKL2-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G44610.1	64.04	2e-129	459		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01143	AT3G44610.1	356	109	5	42	380	71	424	64.04	2e-129	459
Asa6G01143	AT5G47750.1	367	148	6	35	388	186	546	54.50	7e-110	394
Asa6G01143	AT1G79250.2	380	168	4	33	402	139	513	51.84	5e-108	388

Ortholog group

Species	Genes
Allium cepa	g103889.t1; g90672.t1
Allium fistulosum	AfisC2G06342; AfisC2G08133
Allium sativum	Asa6G01143.1; Asa6G03746.1
Arabidopsis thaliana	AT3G44610.1
Oryza sativa	LOC_Os11g05320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	42	196	115.4	2.5e-33
PF00069.22	Pkinase	Domain	266	369	73.5	1.6e-20

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08286	E2.7.11.-; protein-serine/threonine kinase	EC:2.7.11.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network