Detail information of Asa6G01296


Location
GeneChrStartEndStrand
Asa6G01296chr6336149902336158518-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276823.17.9e-57growth-regulating factor 4-like
SwissprotQ6ZIK5.12.4e-42Transcription activator GRF4
trEMBLA0A8J5GTC99.4e-44Growth-regulating factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G13960.158.563e-36 148AtGRF5;GRF5growth-regulating factor 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag225245.t1; g58029.t1
Allium fistulosumAfisC2G07961
Allium sativumAsa6G01296.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain53642.82.9e-11
PF08879.7WRCDomain6710971.14.3e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.