Detail information of Asa6G01424


Location
GeneChrStartEndStrand
Asa6G01424chr6370005465370030198+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010912212.10.0e+00DNA repair protein RAD5A isoform X1
SwissprotQ9FNI6.10.0e+00RAD5 homolog A
trEMBLA0A6I9QMJ60.0e+00DNA repair protein RAD5A isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G22750.163.450.01342RAD5;RAD5ADNA/RNA helicase protein

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Ortholog group
SpeciesGenes
Allium cepag218297.t1
Allium fistulosumAfisC2G08070
Allium sativumAsa6G01424.1
Arabidopsis thalianaAT5G22750.1
Oryza sativaLOC_Os02g32570.1; LOC_Os02g32570.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08797.8HIRANDomain10322253.51.6e-14
PF00176.20SNF2_NFamily351731284.58.1e-85
PF13920.3zf-C3HC4_3Domain78483040.22e-10
PF00271.28Helicase_CFamily85796956.04e-15

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0046872Fmetal ion binding
GO:0005524FATP binding
GO:0008270Fzinc ion binding
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15505RAD5; DNA repair protein RAD5EC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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