Detail information of Asa6G01457


Location
GeneChrStartEndStrand
Asa6G01457chr6378243443378268643-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253488.11.7e-50truncated transcription factor CAULIFLOWER A-like
SwissprotQ6E6S7.19.9e-32APETALA1-like protein
trEMBLA0A8B7D0711.1e-48truncated transcription factor CAULIFLOWER A-like isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G69120.142.567e-36 147AGL7;AP1;AtAP1K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag451958.t1
Allium fistulosumAfisC2G03453
Allium sativumAsa0G01154.1; Asa6G01457.1; Asa8G03429.1; Asa8G03432.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105786.16.9e-25
PF01486.14K-boxFamily10717838.49.7e-10

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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