result

Gene information

Detail information of Asa6G01525

Location

Gene	Chr	Start	End	Strand
Asa6G01525	chr6	396208947	396211074	-

Sequences

CDS

Protein

Gene

>Asa6G01525.1
ATGTCATGGACGCAAGCTGGAATAGTATTTCTGCTCGTGACATTCTTTGCAGTTGGCGATGTCAGTTCAACCCCAACACTAACATGGACCTTAAAGGCAGCACTTGAGGCTGAGAAGGTGGCGAATATTGACTGCTCCAATCATGGCAGAGCTTATACAGATGGAAATCTTGATGTCGCTACGGGTCTTCCAGTTTGCGAGTGCCATAACTGCTATAGCGGTCCAACCTGCGATGATTATGATCAGGACTGCGTTGCTGATGCTACTGTGTAAGCATGATATGTTCAGCTTAATTCACACTGTGCTAATGTAGGTAGCATCATATTGAAAAGAATTTCATGCAAAATAGAAGTAACAAGGCATAGTGATCCTATCATTAATTAGCTTCCTGATAAAGATCGTAGACTGTTACTTAACTCAAAAGAAATGGCAGGCATTGAACCTAAACAATATTGAACAAGAACATTCATCGATATCATTTGACTGAACAAATATTAGGTACCCAAGTTGCTAACATACTTTACTACTTTAATCTGTACATACAGTGGCGATGCGCTGTTTCTAAGGGAGTACTGGATGCATGAAAGACAAGACGTCGCGGTGTTAATATCTGGATGGCACAGACTGAGTTACTTTATTGGCACAGTCACAGACTTCCAGTCCGACGAACTGGAGAGAAATATTAGACTTCTACACGAGGTAGTCGGCAATGCTAATGTCAAAGGCAAATATATTGTTTTTGGGAATGGAATAACTCATCTTCTAAATGGAGTCATTATCTCTTTGTCGCCAAATCTTACAGCTCACCCAGATGCTACGATAAAGAATGTTGTTGCTGCTGCTCCTTATTATCCTGTAAGTCACTAATAAATTACTCATTTTATATCTATTAAACctgatttaatttcaaaagtatTAATCGGTTTTGTGAACATATAAACACAGGTGTTCAAGAGCCAAACCAAGTATTTTGATCATTCAGGATACCGATGGAAGGGAAATGCATCGGACTACGCAAATACAGAAACTCCACAAGATTTCATTGAGATTGTGACTTCACCAAATAACCCTGATGGTTTTCTTCGTAGAAAGCCAGCAATCTCAGGTTCTATGGCTGTATATGATCACGCAATATATTGGCCTCATTATGCGCCTATTCAATACGCAGCAAATGGAGATATCATGCTGTTTACCCTTGGAAAGTACACAGGTCACGCCGGCAGTCGATTTGGGTATGTTTTGcttatatctatctatacatatgtattattCCACCAGTTTTTTCTTATATATTAATTACGAAGATTTGTCGTAAATATTTATTTAGGTGGGCTATTTTAAAGGACGAAGATATTTACAagaaattaacaaaatatgttCTAACAAACAATGCGGGCGTTTCACGTGAAACACAGTTCAGAGCTCTAAAAATCATGAAGGACATTTTGCTATATACACCTTCACGCTCCGAGGACTTCAATAGATTTGGCTATAACGTTTTACGGGAAAGATGGATTAATGTCACCGACCTTGTGAAATTATCTACTCGATTCTCCGTTCAACAAATGGGACCTGAATATTGCAACTACTTCAACGAAATCAGAGAGCCTGCTACAGGTATCTGTTATGCATTTCACATTATACATAGGTTAATTAAGCAGTTAGATGCACGTTACCATGCtacaattttataataattaaaacttcACATTTAACTGAATAATTATAGCTTATGCGTGGCTGAGAACTGAATGGCCTGATGAAGAAGACTGCGCAGCTGTACTAGAGAGTGGAAAAATCAAAGCCAATAGCGGTGTCCATTATGGAGCAAGTAGCCGTTATGCTCGTTTGAGTTTGATCAAGACTGAGGATGATTTTGATCAACTAATGAAACGATTGGATGCTCTAGTTAAAGCCCCACAGGTGAATAGAAATATTTCGAAGTTGGTGAATGAGTTAGTCATTGATGTATATCAGTAACAATCAACGAGCTATGGTaatataaaagtgaatatgcttttgtgttTTTCGGTTTAAGCAATATCTTGAATGAATAAAAGTCTCTTTTCTTCATTCcctacaatgattcatgtttatttcttctctttaatatatatttcagaTCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	AZG03002.1	2.1e-158	alliinase
Swissprot	P31756.1	2.1e-142	Cysteine sulphoxide lyase
trEMBL	A0A3G8G7W4	1.5e-158	Alliinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	42.02	4e-102	368		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01525	AT1G34060.1	445	244	9	8	446	13	449	42.02	4e-102	368
Asa6G01525	AT1G34040.1	448	249	5	8	451	13	452	41.74	2e-101	366
Asa6G01525	AT1G23320.1	375	226	7	73	442	13	377	35.73	1e-68	257

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	28	84	71.7	4.2e-20
PF04864.10	Alliinase_C	Domain	86	445	501.5	1e-150

Gene Ontology

Accession	Ontology	Name
GO:0016846	F	carbon-sulfur lyase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14548	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4	EC:-	Ribosome biogenesis in eukaryotes	ko03008

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network