result

Gene information

Detail information of Asa6G01578

Location

Gene	Chr	Start	End	Strand
Asa6G01578	chr6	412786039	412787375	-

Sequences

CDS

>Asa6G01578.1
ATGGAACCAAAAAAAGCAAAGCTCCTCATCGCTGTATCGATGATCTCCTCCCTACTAATAATCCTACCAATACTATGGAGACTACTTGGCTTGTCCAAATCATTCTTTCTAGTTTTCGGAATCTCCTCCGCTGTAATCATCTCCCTTCTTCTGTGGCTACTGTCCATGTACATATCAATCGATCGTAGAACTATACTAAATCTACGACAAACAGCTGAAGAGATCCGCTTAGAATACAGTTTTCTCAGAAGAGTAGCAGGCCTTCCCGGCAAAATCCCTTTTCATGTTCTCGAGGCCGCTACTGACAACTTCAGCGCTCTTATTGGCCGTGGCTCATCTGGTTCTGTCTTCAAAGGCATTATGGACGATGGGACAGCAGTAGCAGTTAAAGAGATAAACGGGCATGAAGAGCAAGGAGACAAGGAATTCCAGTCTGAAGTGTCGGCAATAGCATGCGTGCAGCATCAGAACCTCATCCGTCTACTGGGTTACTGTATTCTCCCCAAAGGAGGACCTCGGTACTTGGTCTACGAGTACTTTTCGAACGGATCCCTGGACAAGTGGATATTCAACCCGACCCAAGTCCTAACGTGGGGACAGAGATACCGTGTCGCGATCGATGTGGCAAAAGCGCTGTCGTACCTGCACCACGACTGTCGCGCTAGGGTTTTGCACCCTGACGTGAAGCCGGAGAACATACTTTTGGATGAGAGCTTCTGTGCAGTTGTATCTGATTTTGGGCTGTCGAGGATAATGAAGAGGGAAGAGAGCAGAGTGATGGTGAAGATAAGAGGGACAAGAGGGTACCTAGCACCGGAGTGGGTGGTAGGTCATGGAGTTACGGAGAAGTCCGATGTTTTCAGTTATGGGATGGTTCTTTTCGAGCTGGTGGGAGGAAGAAGAAACAAGTTGACAGAGGGAAACAAGGTTTCGTATTTCCCGAAGGTGGTGAAGGAGAAGATGGAGGAAGGGAGGTGCATGGAAGTAGTTGATAAGAGAATGTTCATGGAGGAGGTGATGGAGAAGCAGGTTAAGGATTTGTTGAAGGTGGGGTTGTGGTGTGTGCAGGAGGAGAGTGGAATAAGGCCGACCATGGCGAGGGTGGTGGATATGTTAGAAGGAAGGATTAGGATAGATGAGCCGCCTGATACAGAAATGGTCATCGTTGACATTTTTGGTATTGATGTTGGAGGTGTAGGTTCCGGTGTGGAGGCCGGAGGAGTGGAAGGCTCCAGATGTTCTTCCGTTATGACTGTTTTGTCGGGTCGTTGA

Protein

Gene

>Asa6G01578.1
ATGGAACCAAAAAAAGCAAAGCTCCTCATCGCTGTATCGATGATCTCCTCCCTACTAATAATCCTACCAATACTATGGAGACTACTTGGCTTGTCCAAATCATTCTTTCTAGTTTTCGGAATCTCCTCCGCTGTAATCATCTCCCTTCTTCTGTGGCTACTGTCCATGTACATATCAATCGATCGTAGAACTATACTAAATCTACGACAAACAGCTGAAGAGATCCGCTTAGAATACAGTTTTCTCAGAAGAGTAGCAGGCCTTCCCGGCAAAATCCCTTTTCATGTTCTCGAGGCCGCTACTGACAACTTCAGCGCTCTTATTGGCCGTGGCTCATCTGGTTCTGTCTTCAAAGGTAACTGTTCTTTTACTATTATAGGTGTGTACGTAGTTCCATCAATGACGGCCTCCCCTTTTCAGGCATTATGGACGATGGGACAGCAGTAGCAGTTAAAGAGATAAACGGGCATGAAGAGCAAGGAGACAAGGAATTCCAGTCTGAAGTGTCGGCAATAGCATGCGTGCAGCATCAGAACCTCATCCGTCTACTGGGTTACTGTATTCTCCCCAAAGGAGGACCTCGGTACTTGGTCTACGAGTACTTTTCGAACGGATCCCTGGACAAGTGGATATTCAACCCGACCCAAGTCCTAACGTGGGGACAGAGATACCGTGTCGCGATCGATGTGGCAAAAGCGCTGTCGTACCTGCACCACGACTGTCGCGCTAGGGTTTTGCACCCTGACGTGAAGCCGGAGAACATACTTTTGGATGAGAGCTTCTGTGCAGTTGTATCTGATTTTGGGCTGTCGAGGATAATGAAGAGGGAAGAGAGCAGAGTGATGGTGAAGATAAGAGGGACAAGAGGGTACCTAGCACCGGAGTGGGTGGTAGGTCATGGAGTTACGGAGAAGTCCGATGTTTTCAGTTATGGGATGGTTCTTTTCGAGCTGGTGGGAGGAAGAAGAAACAAGTTGACAGAGGGAAACAAGGTTTCGTATTTCCCGAAGGTGGTGAAGGAGAAGATGGAGGAAGGGAGGTGCATGGAAGTAGTTGATAAGAGAATGTTCATGGAGGAGGTGATGGAGAAGCAGGTTAAGGATTTGTTGAAGGTGGGGTTGTGGTGTGTGCAGGAGGAGAGTGGAATAAGGCCGACCATGGCGAGGGTGGTGGATATGTTAGAAGGAAGGATTAGGATAGATGAGCCGCCTGATACAGAAATGGTCATCGTTGACATTTTTGGTATTGATGTTGGAGGTGTAGGTTCCGGTGTGGAGGCCGGAGGAGTGGAAGGCTCCAGATGTTCTTCCGTTATGACTGTTTTGTCGGGTCGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267949.1	1.2e-150	probable receptor-like protein kinase At5g20050
Swissprot	Q94C25.1	2.4e-108	Probable receptor-like protein kinase At5g20050
trEMBL	A0A5P1FUA3	8.4e-151	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G20050.1	51.24	3e-110	395		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01578	AT5G20050.1	402	176	7	1	384	1	400	51.24	3e-110	395
Asa6G01578	AT4G32300.1	341	179	5	51	387	445	779	44.57	5e-86	315
Asa6G01578	AT5G24080.1	349	182	8	45	388	82	416	42.41	3e-74	275

Ortholog group

Species	Genes
Allium cepa	g118711.t1
Allium fistulosum	AfisC2G03939
Allium sativum	Asa6G01578.1; Asa6G01579.1
Arabidopsis thaliana	AT5G20050.1
Oryza sativa	LOC_Os06g05070.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	106	369	154.4	3.3e-45

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network