result

Gene information

Detail information of Asa6G01579

Location

Gene	Chr	Start	End	Strand
Asa6G01579	chr6	412940719	412941984	-

Sequences

CDS

Protein

Gene

>Asa6G01579.1
atgggatgctcgtcaaggtggagatacgaTTATAAGCAGTCTGCCTCCActactgcttatgagaactcgggtaGCAGCCTGACCAACTGCGAAGAGATCTCAAGGTGTAACtccaaggtgacttgagcaatgctttCCAAAGTGGATATTTTTAGGTGTAGCttgaattggaatggagtgggtgcatgGATTGAATGGACGAATTGTCCCAcattgcaagaaaataagaaagatcgtggtatatacatggtgttggtggcatgtaacattggggatttcTTTTGTttcaataagtgcttgccaataccaaattatatgctcgatgggaggcaatgagggatgttcaatcgggacgtcgGCATAGGAGACTTCGACCTGTTAACTCGGATAGATACAGTGAAGCGTGTACGGTACgtagggaatgccgaaactcaacaccAAAGAGATCCGCTAAGAATACAGTTTTCTCAAAAGAGTCGCAGGCCTTCCCAGCAAAATCCCTTTTCATGTTCTCGAGGCTGCTACTGGCAACTTCAGCACTCTTATTGGCCATGGCTCATCTGGTTCTGTCTTCAAAGGTAACTGTACTTCTTTTACTATTAGAGTGTGCGTAGTTCCATCAATGATGTCCTTCCCTTTTCAGGCATTACGGACGATGGAACAACAGTGGCAGTTAAAGAGATAAACGGATTGGAAGAGCAAGGAGACAAGGAATTCCAGTCTGAAGTGGCCGCAATAGCAGGCGTGCAGCATCAGAACCTCATCCGTCTACTGGGCTACTGTATCCTCCCCAAAGGAGGACCTCGGTACTTTGTCAATGAGTACTTATCCAATGGATCCCTGGACAAGTGGATATTCAACCCAACTCGATTCCTAACGTGGAAACAGAGATACGGTGTTGCGATCGATGTGGAAAAAACGTTGTCGTACTTGCACCACGACTGTCATGCTACGGTTTTGCACCTTGATGTGAAGCCGGAGAACATACTTTTGAATGAGAGCTTCTGTGCAGTTGTATCTGATTTTGGGTTGTCGAGGATATTGAAGAGGGAAGAGAGCAGAGTGCTAGTGAATATGAGAGGGACGATAGGGTACTTAGCACTGGAGTGGATGGTAGGTCATGGAGTTACGGAGAAATCCGATGTTTACAATTATGGGATGGTCATTTTCGAGCTGGTGGGAGGAAGAAGAAACATGTTGATAGCGGGAAACAAGGTTTCGTATTTTCCGAAGGTGGTGAAGGAGAAGATGAAAGAAGGGAAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267949.1	2.8e-78	probable receptor-like protein kinase At5g20050
Swissprot	Q94C25.1	1.1e-69	Probable receptor-like protein kinase At5g20050
trEMBL	A0A5P1FUA3	2.1e-78	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G20050.1	55.60	2e-73	272		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01579	AT5G20050.1	241	91	4	41	266	101	340	55.60	2e-73	272
Asa6G01579	AT4G32300.1	232	117	4	39	266	489	717	46.55	2e-58	222
Asa6G01579	AT2G19130.1	220	107	4	41	255	491	707	47.73	8e-55	210

Ortholog group

Species	Genes
Allium cepa	g118711.t1
Allium fistulosum	AfisC2G03939
Allium sativum	Asa6G01578.1; Asa6G01579.1
Arabidopsis thaliana	AT5G20050.1
Oryza sativa	LOC_Os06g05070.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	47	242	127.3	5.8e-37

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network