result

Gene information

Detail information of Asa6G01879

Location

Gene	Chr	Start	End	Strand
Asa6G01879	chr6	492290230	492292805	-

Sequences

CDS

Protein

Gene

>Asa6G01879.1
ATGGCCTTACTGTTATTGCTTACTGCTATACTGGCATCAATTATTTTTGCCATTGCACTCCTCGCTTTCACAAGAACTGGAATTAAAAAAAACCCAAGAAAACTACCACCTGGAAGGAAAGGGTGGCCTCTTATTGGGGAAACCTTTTCTTTCTGGGAGACTCACCCACAAAATTCAGTTGGAGAATTCATGCAACGTCGCTTGTCAAGGTATGATCAGTCTTTTGGAGATATTAATATCCCAATTTTGGAGATATTAACATATGCAGCTATCCATAGGTTTGGAAATGTCTTCTCAACCCATTTGATTGGGTGTATGAGTGTAGTGTCGGCAAACCATAAGTTAAACAGGCTAGTAATGAACAATGAAGTATTATTCGGGCCCGGCTTGCCTCGTGCTTTTACAAATGTATTAGGCGAAATGGCATTAATGGTTGGAGATGTGCATAAACATATGAGAATGACAGTTCTTGATTTTTTACATCCTGAGAGGATGAGGTCCATCTTTTTTCAAGATGCAGATGCTCTTGCTTCGGAGCTTGTAAGCTTATGGAAGGACGGTGATGTGATTTCTGTTAAGGAGGAATCAACTAAGGTGGAAATATGAAGTATAATACATACTTAGTGATGTTAATTACATAGATACAAGTCTCTGTTCTTATTCCGAGTTACCACCTTTTGTAGTTTTCTTTCTCCATAATGGTGAAAAGATTATTAAGCATGAAGGTTGATGATGATATTGAGAAGCTGGCAGCACACTATGATTCAGTAACCAGGACGTTTACCAGCACTCCACTCTATTTTCCAGGAACTACTTATTGGAAAGCGCTACATGTATCAATATgaaattatcttcttcttctcaatATGGACCACTATATCACCTgttatcattaaaataatttcaAGTCGTGCTATTATATTTGAGTCCTTTTcaaaaaacgttttgaaatcagCGTCTGCATATTATATTACTATATTAAGGAAAGCATGgggaaacaaaaattatattaagtTTTCAGGAAAGATCTCTACACTGTAATTGCTcaaatgttttttcttttcttcttttttgtatTTAGGCAAgagaaattataattaatatgtttaagCAAGAGATAGCAGCGAGGAGGGGAACTGAATGGAATGAAGCAGGGAAAGATGACTTCCTTGCCTGGTTAATGAAAAATACAGATTATTCAGAAGAGAAGATTTGTGATTTTTTGTTAGGCATGCTTTTTGCTGGGCATGATACTGCTACTCGTGCAATATGCTTACTGATATATTATCTTGAAAGCTGTCCAGAAGCTATATCTAAACTCAGGGTAATAAAAACTTAAAACTCTCATGGAAGAAATTACATGACTATATATTACAGTCACATGAGACACGACGCACTGCTCCTTATTTGAATCTTTATGAAGTGTTTGGATGACATAAAACACATTCCAGGAAGAGCACAATCAAGTTCTCGTATCAAAGCAGCAAGGAGGCGAGAGCAAACTCACATGGGATGATTACAAGAAAATGGAATTTACAAAATGTGTAAGTTCAACAAATGAAACTTTCAGATCATAAATGTTTAATTTTATATGGATCTTGTAATTGTAGGTCATCAACGAGACACTACGACTTGGTAATATTGTTAGGTTTTCCATGAGAATGGCTGCAGACAATGTCGAATTCGAAGGTACACATTATATTTTAGTCcattattttttttcttccaattatataatttagttctgatataaattaattttatttttgaactatttttttaataaaatgattggGAATTCCTTGTcaaaatgtagatttttttttttttctacctTTCCCTTTGTCTTGACATGAAGCTGACATTATTTATTTAGACTATATAATTCCAAAGGGATGTCGTGTGTTAGTCCATTTTGCTGCAGTGCATTTGGACCCTTCTCTCTACGAAGATCCTACACAGTTCAATCCATGGAGATGGCTGGTGCGTGATCGAAATTCATCTAATATTATTAACAATACAACTCATGTTGAAATTCATATTCTTTTTATCGCTTTTGTCtggtttaaaactaattaaaagCATAGCATCGTGTGTGATTTTCAAGCATTAGATCAAATATTCTACGGGTTCACATCCACATGTACATTACATcttctctttgtttatttttacaCACTAAAGTGTATATGTGGATCCATATCATCAAAATTTTGGTCAAATCGTCGAACAAAATATTTGAACTCGGGCTCAGGTTGAACCATTTTTTGCATTATAGTTGAAGTTTTTTTTTTCCCTATGATAGGgctaatccctttttatttatatttttcatttcacagTCATCATCTGGTGTAAAGAATTTTGACAGTTTCATGCCATTCAGTAAAGGACCACATATGTGTCCTGGAGCAGACCTTGCAAGAATGGAAATGATAGTTTTTCTTCACCATATCATAATGAAATACAACTGGGAACTAGCAGAGCCGGATCATCCAATTGTAACACCGCACGTTGAGTTTCCGAAAGATCTACCAATCAAAATTCAAGCAATATATAAATATTCCGGTGTCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261199.1	3.5e-154	cytochrome P450 90B1-like
Swissprot	Q5CCK3.1	1.3e-108	Steroid 22-alpha-hydroxylase
trEMBL	A0A097PA02	1.7e-150	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	37.18	3e-104	375	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01879	AT3G50660.1	503	255	7	29	493	33	512	37.18	3e-104	375
Asa6G01879	AT1G73340.1	524	301	10	7	490	11	504	29.20	2e-72	270
Asa6G01879	AT5G05690.1	498	280	10	2	491	5	466	34.94	3e-70	263

Ortholog group

Species	Genes
Allium cepa	g211225.t1
Allium fistulosum	AfisC2G04264
Allium sativum	Asa0G02092.1; Asa5G01743.1; Asa6G01870.1; Asa6G01879.1; Asa6G01886.1; Asa6G01888.1; Asa6G01889.1; Asa6G01898.1; Asa6G01900.1; Asa6G01901.1; Asa6G01903.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	92	474	213.8	3.6e-63

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09587	CYP90B1, DWF4; steroid 22-alpha-hydroxylase	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network