Detail information of Asa6G01909


Location
GeneChrStartEndStrand
Asa6G01909chr6498680506498688553+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250546.12.6e-177U-box domain-containing protein 34 isoform X1
SwissprotQ8S8S7.19.7e-137Serine/threonine-protein kinase
trEMBLA0A5P1FRQ11.9e-177RING-type E3 ubiquitin transferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G57035.151.905e-148 521U-box domain-containing protein kinase family protein

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Ortholog group
SpeciesGenes
Allium cepag8995.t1
Allium fistulosumAfisC2G04271
Allium sativumAsa6G01909.1
Arabidopsis thalianaAT2G19410.1; AT5G57035.1
Oryza sativaLOC_Os02g12670.1; LOC_Os06g37620.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07714.14Pkinase_TyrDomain25034059.23.3e-16
PF00069.22PkinaseDomain34847231.41.1e-07
PF04564.12U-boxDomain50056666.71.4e-18

Gene Ontology
AccessionOntologyName
GO:0000151Cubiquitin ligase complex
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0004842Fubiquitin-protein transferase activity
GO:0005524FATP binding
GO:0016567Pprotein ubiquitination
GO:0006468Pprotein phosphorylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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