result

Gene information

Detail information of Asa6G01920

Location

Gene	Chr	Start	End	Strand
Asa6G01920	chr6	502572469	502575507	-

Sequences

CDS

>Asa6G01920.1
ATGGAGCTTGTTAAAGATGATGAAAAGGCTAGAGAAAAGCGAACTGGCGAAGAGGCTTTTTCAAATTCATCTTCTCCGACGAGACAAGATTCAGACGACACAAGCAATATTCAGGCTTCCACAGTGCTGGAAAGTAAAATTATATCGTCCATGGACACACCTCCTTTAAGCATCAAGCCAACTAATCAGATACTTGAATCCACTAAAGTAGAGATGGGAGAAGTAAGAGAAGAGAATGAAAGGCTGAAGACACTTCTTGCCAAAGTTGTGAAAGATTACAAGTCTTTACAAACACATTTCTTCGACATCGTCCAACACGAACAACCATCAAAATCCGAAGACGACACCTCAAAATCAATGGAAATTATTGATCAAGACCCCGATCATCTTGTCTCACTAAGTCTTGGAACAAATAGTTATATTGAGCAAAAGAAGAATAAAGACAGTAGCAGTGAAACTAAAAATTATGATCAAGAAGGATTAACTCTTGGATTAGATTTCAAACTCGAAGGGTCGAACACTTCAAATGCTAACGTTAGTGCAAGTAATAGCGTAGAGGAAGCGAAAGAAGAAGAGGTAGGAGAACAATGGCCCCCAAGTAAAATACAGAAGAGTATTGCCAGTAGTCCAGATGTTGATGAAGCTTCGCAGCAAGCACATGTTAAGAAGACTAGAGTTTCTGTGAGAGCAAGATGTGAAACACCAACTATGCATGATGGATGCCAATGGAGAAAGTATGGACAAAAGATTGCCAAGGGGAACCCTTGCCCTAGGGCTTACTATAGATGCACTGTTGCAGCAGCATGCCCCGTTAGAAAACAGGTACAAAGATGTGCAGAAGACATGTCGATTCTAATAACAACATACGAAGGCACACACAATCATCCATTACCGATCTCCGCAACAGCAATGGCCTCCACGACCTCAGCCGCTGCACGCATGCTGATCTCTGGATCAACCACTTCTTCATCAACTCCTATATCCTCCATTCCAACCCTAAATTCGAACCCCATCACCAATTTGAATGCACTAAACTTCAACATGTCAAACCCTAGTTCTCACCCACGACCTTTTTACTTCCCAAACCCCACCATCTCGTCCACCCCTTCCTATCCAACCATCACGCTCGACCTAACGTCTCCACCACAAACCAACATGCAAACTTCGCAATTCAACAGAATATTCCCTTCTAGGTACTCCACCAACTTCAACTTCTCCACGTCGGAGCCTAATCCGACACTTCCAATAACATCTTGGCCCAGTGGATCGTACTTGAACTACAATAAAGGCTCGATAGCCCCGACAAGCTCACTTGGGCCATTGTCGCAACAGTCCTCCTACCTAGAAAGAGCTTCTAGTATTCCATCAATTGGTGGTGGGCAGAATATGTTGACGGACACGATTGCAAAGGCTATCACGTCCGATCCGAGTTTTCAATCTGCATTGGCTAATGCAATAACGTCGTATGTGGGTGGACCAAACGGGCCAGCCCGTACTGGATCAGGTTTGATGTTGATGCAAAGGCCATTGAACTTCGCAAAATCGAGAAGCACCTCGACATCTCCGGTTGAGAATAGAGAAAATATCAATTAG

Protein

Gene

>Asa6G01920.1
ATGGAGCTTGTTAAAGATGATGAAAAGGTTAGTTTTCCCAGCCCTTATCATTAACTTAAATTTGTTTATCATGCATCTTTTATTCAGTATATTGTTTATATTGACTGCATGAAATTACATAAATTCTTGTTATTAGTTGTAAAGAGCTTGAATAATTTATGTGGCCAGAGATGTTAATTCACAGATTTTTAGCTCTATGTAGACTATTTGAGTTTTTTGTTTACTGGTCAAGACATATTTATCCAAGTTGTAACTTGTATTGCATGGTACACATACATCATCTTATCTTTTAAAGGCAAAATAATTCTCCAAAAacacatgaaataaaaataaatgatcatttcatattgattattTGATTTGTGACATATTTTACTTGAAGTCgatcaaattcaaaacaataacttTCAAGATGGATGCACGTACGTAGACAAAAATCTGAGTTTGAAGTTTATAATAGTCATCCAATAGCTTTAACTTTCAATGAGACTAAGAAAACCAATTCAATAAatctatattcatatatatgaaaataaaactcTTATACAGGCTAGAGAAAAGCGAACTGGCGAAGAGGCTTTTTCAAATTCATCTTCTCCGACGAGACAAGATTCAGACGACACAAGCAATATTCAGGTACACATGAACTTCTCATGCAAAATTAAGTAATTCTGTGTTAGTTTAGTTTTTAAATAAAGAGTGTTCCAATTTTGATAATATTTGCTTATTGCACAAATATCTACATATTTATTTATCAGGCTTCCACAGTGCTGGAAAGTAAAATTATATCGTCCATGGACACACCTCCTTTAAGCATCAAGCCAACTAATCAGGTTAGGGTAGTTTTTTTTAGGTTCTGTACCCTATAAATACTGCCAGGCTTCTAAAATTTTAGAATATTATAACATCGTTACAGATACTTGAATCCACTAAAGTAGAGATGGGAGAAGTAAGAGAAGAGAATGAAAGGCTGAAGACACTTCTTGCCAAAGTTGTGAAAGATTACAAGTCTTTACAAACACATTTCTTCGACATCGTCCAACACGAACAACCATCAAAATCCGAAGACGACACCTCAAAATCAATGGAAATTATTGATCAAGACCCCGATCATCTTGTCTCACTAAGTCTTGGAACAAATAGTTATATTGAGCAAAAGAAGAATAAAGACAGTAGCAGTGAAACTAAAAATTATGATCAAGAAGGATTAACTCTTGGATTAGATTTCAAACTCGAAGGGTCGAACACTTCAAATGCTAACGTTAGTGCAAGTAATAGCGTAGAGGAAGCGAAAGAAGAAGAGGTAGGAGAACAATGGCCCCCAAGTAAAATACAGAAGAGTATTGCCAGTAGTCCAGATGTTGATGAAGCTTCGCAGCAAGCACATGTTAAGAAGACTAGAGTTTCTGTGAGAGCAAGATGTGAAACACCAACTGTAAGTGTAAACAtgttacatacacacacatgtagtATGATTCATATGTGTAGATGCATATGTGTAGATGTGTAGATGCATATGTTTAATGTTATATATTTGTGTGTACATATGTGTAGATGCATGATGGATGCCAATGGAGAAAGTATGGACAAAAGATTGCCAAGGGGAACCCTTGCCCTAGGGCTTACTATAGATGCACTGTTGCAGCAGCATGCCCCGTTAGAAAACAGGTAACAATGCACGGATATTGTGCTTTGAAACAAACATCAGTGCAATTAGTTTTGTATTTAAAGCGTTAAACTTGAAAGCTCTGAGCATAAACCTAGTTTAACTGAGCATtatgttaataattaaaattaacatgGGGAACTCAAGCCTATGACATAAGTTCAGTTTGATAGTGTTATTAAACTAATTTTGAACACTTGTAAATTTTCAACGGTTtaacagttttaattttatattgtttgtATTGTTGAAAACCAAATTGTTTTAGAACAAAACATGTAAAATTGAAAATGAGCATATAGgaattgtaaatcattttatttttattgtttggcaATTCTTATTTAAGTTTGAAAACAGAAAACTCAAAGTAGAAAATGAAACCAAAAGTTACTAAAATTCAAAGCATGCTTTTGCATACTATAAACCGCTGATAAGAACATCTTAAAACCAAAGCTTTCATTAAGGATGAAAGCTGATATCATTGAATTCTTTTGTAACACATGCTAAGAAAATTTCAAGCGTCttagtttattcaaaaatataacttaccaattcatacatatatatatcgacatCCTTCAATTCTTGAACCATACCAGGTACAAAGATGTGCAGAAGACATGTCGATTCTAATAACAACATACGAAGGCACACACAATCATCCATTACCGATCTCCGCAACAGCAATGGCCTCCACGACCTCAGCCGCTGCACGCATGCTGATCTCTGGATCAACCACTTCTTCATCAACTCCTATATCCTCCATTCCAACCCTAAATTCGAACCCCATCACCAATTTGAATGCACTAAACTTCAACATGTCAAACCCTAGTTCTCACCCACGACCTTTTTACTTCCCAAACCCCACCATCTCGTCCACCCCTTCCTATCCAACCATCACGCTCGACCTAACGTCTCCACCACAAACCAACATGCAAACTTCGCAATTCAACAGAATATTCCCTTCTAGGTACTCCACCAACTTCAACTTCTCCACGTCGGAGCCTAATCCGACACTTCCAATAACATCTTGGCCCAGTGGATCGTACTTGAACTACAATAAAGGCTCGATAGCCCCGACAAGCTCACTTGGGCCATTGTCGCAACAGTCCTCCTACCTAGAAAGAGCTTCTAGTATTCCATCAATTGGTGGTGGGCAGAATATGTTGACGGACACGATTGCAAAGGCTATCACGTCCGATCCGAGTTTTCAATCTGCATTGGCTAATGCAATAACGTCGTATGTGGGTGGACCAAACGGGCCAGCCCGTACTGGATCAGGTTTGATGTTGATGCAAAGGCCATTGAACTTCGCAAAATCGAGAAGCACCTCGACATCTCCGGTTGAGAATAGAGAAAATATCAATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_017701728.1	2.5e-110	probable WRKY transcription factor 72 isoform X2
Swissprot	A0A3Q7GFB5.1	2.4e-73	WRKY DNA-binding protein 72A
trEMBL	A0A8B7MWR3	2.4e-102	WRKY transcription factor 72A-like isoform X3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G15130.1	41.83	7e-75	278	ATWRKY72;WRKY72	WRKY DNA-binding protein 72

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01920	AT5G15130.1	471	194	17	62	491	33	464	41.83	7e-75	278
Asa6G01920	AT1G18860.1	490	195	20	72	492	1	463	40.61	1e-65	248
Asa6G01920	AT4G04450.1	338	140	11	68	379	109	416	42.01	3e-54	210

Ortholog group

Species	Genes
Allium cepa	g143060.t1; g510867.t1
Allium fistulosum	AfisC2G04281
Allium sativum	Asa6G01920.1
Arabidopsis thaliana	AT5G15130.1
Oryza sativa	LOC_Os06g05380.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	239	296	91.1	3.7e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13424	WRKY33; WRKY transcription factor 33	EC:-	MAPK signaling pathway - plant	ko04016
K13424	WRKY33; WRKY transcription factor 33	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network