result

Gene information

Detail information of Asa6G01947

Location

Gene	Chr	Start	End	Strand
Asa6G01947	chr6	510325267	510327219	-

Sequences

CDS

>Asa6G01947.1
ATGAATAGTATTACAAATTCTAATGCTAGCTCATCCGAACAGAATGATCCTTTAGACATTAAACCATTGAGAAGTTTAGCTCCAATGCGACCTTCATCACTTGGACTTGGCACAGACGTGGTTCCTACATGCGACTCTACTCCCTTAGTTTGTGTCACACCATTTGGATCATACATGATTAACTCTGACCCTAGAGTGCCCCCAAGTTTTTTACCCATGTTTCCCAGTGTAGCACAAACTAAAAATCAGACTGCAGTGTATGCTACTCCGCTTAATACAAGAAGCAAACATGTCATAATCGATTCCAATGGAAAGAGCGTTCCTATTGGTTTTCGTTCTAGAGGTTCAAAAGGTACGGATGAAAGGAAACCAAAGCGTGGAAAGCCAACACATGTTTATGACCGTTCATTGGTTCTTCCTCCATCTAATGATCCAAGAGAATCGGTTGAGGCAATCCTTATTCTTTTTGATGCACTCAGGAGAAGATCACAACAGCTGGAAGATGGAAGTGAAGGGATTAGGCGTCCGGATCTTAAGGTGGGACCCATTATGAGCGATCATGGGTTAAAGATAAATGAGAATAGGACAGTGGGTCCAATTCCAGGAGTTGAAGTTGGAGATATTTTCTATTTTAGGTTTGAGATGATTTTGACAGGAATTCACCATCAGATCATGGGTGGAATTGATACGGCTACCATTAAATTTGGCAATGAGGAGGACACCGTGGCTTCTTGCATTGTGTCTTCTGGATATTATGAAAATCACGTTGAAGATGCGGAGACTATTATTTACAGTGGTCAAGGTGGTTCAGGTAAAGATGATCAAAAGCTCGAAAGAGGCAATCTTGCCTTGGAGAGAAGTTTGCATAGAGGTAGTGAAGTAAGAGTTATTCGAAGTGCAAAAGATTTCACATGTGCTAATGGAAAGATTTACATGTATGATGGCATTTATAAAATTCATGAATCGTGGGTAGATAAAGGGAAAACAGGGTTTAACATTTTTAAATTCAAGTTGCTAAGGGAACCAGGGCAGCCAATTGGATATGCGGTGTGGAAAATGGCTGAAAAATGGTTAGAAAACCCTTCATCAAGAGGCAGAGTTATTCTTCCCGATTTGTCCTCAGGAAGTGAAAATATTCCTGTTTGTCTTGTCAATGAAGTAGATAGTGAGAAAGGACCGAGTCATTTCAAATATGTAACTAAAGTTAATTATCTGAGTCATGTCAGCTCTTTAAAACCAGTGCATAAATGCATGTGTCATGGTGTATGTCTCCCTAGGGATGGGAATTGCTCTTGTGCACAAGAGAATGGTGGAGATCTCCCCTATAGTTCTAATGGTCTCCTTGTGAGTCGTATGCCTCTTCTACATGAATGCAGCAATTTATGCTGTTGTGCTAGTAATTGTAGAAATAGACTTACACAACGTGGTATTAAGCTAAATTTTGAAGTGTTTAAAACTAATGACCGAGGTTGGGGTCTTCGTTCTTGGCATCCAATTCGTGCTGGCTCTTTTATTTGCGAATACACAGGCGAAGTTATTGATAAAATCACAGCCGATTTGAATAGCGAACATAATGAGTACATCTTTCACGGGCTTAGTGAGGACAAAAAGATCAGATGGAATTATATTCCTGAATTACTTGATGAGTCTAGCGGTAGTGAACCGAGTGAAACTCCTAAGCCCTTGCCTTTTGTTATAAATGCAAAGAATATGGGCAATATAGCAAGGTTCATGAACCATAGTTGCTCTCCTAATGTATTCTGGCAGCCTGTTTTGCATGATCATAGTGACGTGGATTATCCACATATAATGTTTTTTGCAATGAAGCACATTCCTCCTATGACTGAACTTACGTATGATTATGGTTTGACTAAAGGAGATCCATTTGTTGTATCACAGAGAACAAAGAAATGTTTATGTGGATCATCAAAGTGTCGAGGAGTCTTTGGCTGA

Protein

Gene

>Asa6G01947.1
ATGAATAGTATTACAAATTCTAATGCTAGCTCATCCGAACAGAATGATCCTTTAGACATTAAACCATTGAGAAGTTTAGCTCCAATGCGACCTTCATCACTTGGACTTGGCACAGACGTGGTTCCTACATGCGACTCTACTCCCTTAGTTTGTGTCACACCATTTGGATCATACATGATTAACTCTGACCCTAGAGTGCCCCCAAGTTTTTTACCCATGTTTCCCAGTGTAGCACAAACTAAAAATCAGACTGCAGTGTATGCTACTCCGCTTAATACAAGAAGCAAACATGTCATAATCGATTCCAATGGAAAGAGCGTTCCTATTGGTTTTCGTTCTAGAGGTTCAAAAGGTACGGATGAAAGGAAACCAAAGCGTGGAAAGCCAACACATGTTTATGACCGTTCATTGGTTCTTCCTCCATCTAATGATCCAAGAGAATCGGTTGAGGCAATCCTTATTCTTTTTGATGCACTCAGGAGAAGATCACAACAGCTGGAAGATGGAAGTGAAGGGATTAGGCGTCCGGATCTTAAGGTGGGACCCATTATGAGCGATCATGGGTTAAAGATAAATGAGAATAGGACAGTGGGTCCAATTCCAGGAGTTGAAGTTGGAGATATTTTCTATTTTAGGTTTGAGATGATTTTGACAGGAATTCACCATCAGATCATGGGTGGAATTGATACGGCTACCATTAAATTTGGCAATGAGGAGGACACCGTGGCTTCTTGCATTGTGTCTTCTGGATATTATGAAAATCACGTTGAAGATGCGGAGACTATTATTTACAGTGGTCAAGGTGGTTCAGGTAAAGATGATCAAAAGCTCGAAAGAGGCAATCTTGCCTTGGAGAGAAGTTTGCATAGAGGTAGTGaagtaagagttattcgaagtgcaAAAGATTTCACATGTGCTAATGGAAAGATTTACATGTATGATGGCATTTATAAAATTCATGAATCGTGGGTAGATAAAGGGAAAACAGGGtttaacatttttaaattcaagttgctAAGGGAACCAGGGCAGCCAATTGGATATGCGGTGTGGAAAATGGCTGAAAAATGGTTAGAAAACCCTTCATCAAGAGGCAGAGTTATTCTTCCCGATTTGTCCTCAGGAAGTGAAAATATTCCTGTTTGTCTTGTCAATGAAGTAGATAGTGAGAAAGGACCGAGTCATTTCAAATATGTAACTAAAGTTAATTATCTGAGTCATGTCAGCTCTTTAAAACCAGTGCATAAATGCATGTGTCATGGTGTATGTCTCCCTAGGGATGGGAATTGCTCTTGTGCACAAGAGAATGGTGGAGATCTCCCCTATAGTTCTAATGGTCTCCTTGTGAGTCGTATGCCTCTTCTACATGAATGCAGCAATTTATGCTGTTGTGCTAGTAATTGTAGAAATAGACTTACACAACGTGGTATTAAGCTAAATTTTGAAGTGTTTAAAACTAATGACCGAGGTTGGGGTCTTCGTTCTTGGCATCCAATTCGTGCTGGCTCTTTTATTTGCGAATACACAGGCGAAGTTATTGATAAAATCACAGCCGATTTGAATAGCGAACATAATGAGTACATCTTTCACGGGCTTAGTGAGGACAAAAAGATCAGATGGAATTATATTCCTGAATTACTTGATGAGTCTAGCGGTAGTGAACCGAGTGAAACTCCTAAGCCCTTGCCTTTTGTTATAAATGCAAAGAATATGGGCAATATAGCAAGGTTCATGAACCATAGTTGCTCTCCTAATGTATTCTGGCAGCCTGTTTTGCATGATCATAGTGACGTGGATTATCCACATATAATGTTTTTTGCAATGAAGCACATTCCTCCTATGACTGAACTTACGTATGATTATGGTTTGACTAAAGGAGATCCATTTGTTGTATCACAGAGAACAAAGAAATGTTTATGTGGATCATCAAAGTGTCGAGGAGTCTTTGGCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249682.1	2.4e-256	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like
Swissprot	Q9FF80.1	2.1e-156	Suppressor of variegation 3-9 homolog protein 1
trEMBL	A0A8B7D0K6	4.6e-217	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G04940.1	51.34	2e-154	542	SUVH1	SU(VAR)3-9 homolog 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01947	AT5G04940.2	524	234	8	143	650	152	670	51.34	2e-154	542
Asa6G01947	AT5G04940.1	524	234	8	143	650	152	670	51.34	2e-154	542
Asa6G01947	AT1G73100.1	672	306	16	18	650	22	669	45.09	1e-153	540

Ortholog group

Species	Genes
Allium cepa	g180458.t1; g356198.t1; g409580.t1; g433469.t1; g442815.t1
Allium fistulosum	AfisC1G08965; AfisC2G04297; AfisC2G07479; AfisC4G06953; AfisC5G02664; AfisC5G02675
Allium sativum	Asa4G03709.1; Asa4G04463.1; Asa5G05814.1; Asa6G01947.1; Asa7G07174.1
Arabidopsis thaliana	AT1G73100.1; AT5G04940.1; AT5G04940.2
Oryza sativa	LOC_Os01g59620.1; LOC_Os05g41172.1; LOC_Os05g41172.2; LOC_Os11g03700.1; LOC_Os11g38900.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02182.14	SAD_SRA	Domain	197	344	142.9	5.5e-42
PF05033.13	Pre-SET	Family	373	471	58.2	9e-16
PF00856.25	SET	Family	490	622	81.0	1.1e-22

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0042393	F	histone binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0016571	P	histone methylation
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0034968	P	histone lysine methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Lysine degradation	ko00310
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network