result

Gene information

Detail information of Asa6G01988

Location

Gene	Chr	Start	End	Strand
Asa6G01988	chr6	521026500	521029093	+

Sequences

CDS

>Asa6G01988.1
ATGCTGCAACTAAACCCAAACTTGCTGTTCCTCTTCATCGCCGTCATCATCTGCTCTTCTTCTCTAAGTAGCAGTGCTCAGCTGCCTTTTGAAATCCCATCAGCAAATATATCGACGAAATGGATAAACAACGACCAGTCCATAAAACAGAACCGCATGTTTGATGACTATGTAATTGCAAGATCCATCCTCATAAGACGAACATATGGTCCAGCATTTATTTCTGTTTTCAATCAGAACAGTACAAATGGCTCAGAATTTGGCCCAGCATTTGGTTGTGGCTTTATCTGCACTACTGGATCATGCACTTCCTTTCTATTCTCCATCTTCATAGGTTACTTAAACCCAGAATGGAATGCCACCTCCCCACCAATAGTATGGTCAGCAAACCGTAGCTACCCTGTTCGGAGAAACGCCACGCTGGAATTTTCCAGAGACGGGGACTTGCTTCTACGCGATTCCGATGGCAGCCAAGTCTGGTCTACTAATACTTCTGGAAAGTCGGTGGTTGGTCTGTTGTATCTTAGTATTGTTAGTGGTGGTTTCAAGGCATTTGTTGGTTCACAATTGTACTATGACAGTACTACCTTTAATCTTCCCACAAGACAAGAACAGCCTACTCATATTATGTTTAATAATGGCAGCTTAGAAACATATGCTGGATCGAGCAAACCTGTTCCATTTATATCGTTACCGAAAGCAAATTTGGTTCAGTATATGCAACTTGTTTACATGGGCCATTTGAGAATTTATGCGTGGAGTTCTACCGGGTGGACTTTCTTAAAGGATGTTTTCCAGGTTGCTTATAATGATTATGATGATTATTGTACATATCCCAATGTCTGCGGAGAGAATGGGATATGCTCCAGTGGACATTGTTCTTGTCCGGTTTCAGATGATGGCAGTATGAATTACTTTAAACCAGTCGATCATACAAATCCAAACCTTGGTTGCGTGCCATTTAACGCTCTTTCATGCAAATCAGCCAAAACACATCAACTTCTAACACTCTTCAATGTGTCTTATTTCTCTGTTGATCAAGGAGAAGCCCCGTACAGTAACAATTCAAATGCAGAAGCTTGCAAGCAAGCATGTTTGGCAGACTGTTCTTGCAAAGCTGCATTTTTTCAATATTATTATGAGTATAAAGATTTTGGAACGAACTGTTACTTGGAATACGAGTTGTACTCGTTGAACAACAATCTACCAAAATATTCCGGTATAAAATCATCTGCATTTATCAAAGTGCAATCATTTCCTACTACAAATACAACACCTAGAACAAACTCCACCAACTTTATACAAAGTAAAGTTAGTGTTAGTCTTATAGCTGGTGTTAGTGTCGCTTCTCTACTTGCTTTTATTCTTATCATTGCATGCGTCATAGCTTTTCTAAGGAGAAGATACAGTTATAGAGAAGCTGAGGATGTTGATGAATTTGCTATGACGTTATTACCTGGACTGCCTACAAGATTTGCGTTTGAAGATCTCAGGGTTGCTACTAACGACTTCTTACGAAAACTTGGAGAAGGTGGATTCGGTTCTGTTTTCGAAGGAACACTAACCGATGGCACTAATATAGCCGTTAAAAGATTAGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCTGAGGTTGAAACCATTGGTAGTATTCATCATGTACATTTGGTGAGATTAATTGGATTTTGTGCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCACTTGATAAATGGATTTTCTACAAAGATCATGATTTTGTTATAGATCGGCAAACAAGACGTAGTATCATAAATGATATAGCAAAGGGATTGACATATTTACATGAAGATTGCAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTCTTGAACGAGAATTTCAATGCTAAAGTATCAGATTTTGGATTAGCAAAACTTATCAATCGAGACCAGATCGAAGTAGTTACAAGAATGAGAGGCACGCCTGGATATTTAGCGCCGGAATGGTTGACATCGGTTATTACCGAAAAAGTGGATGTCTTTAGCTTTGGTGTCGTGGTGCTTGAAATTGTACGTGGAAGAAGGAATTTAGATTACTCAAAAGATGAAGAAAGCTTTCATTTAGTTAGTCTCTTGCAAAGAAAAGTTATAGAAAACAAGTTAGTGGATATGGTTGATTGTCGTTGCACTGATATGCAGAATCATATCGATGATGTTACAGAGATTATTCATCTTGCAATGTGGTGTCTACAGGGTGATAGTAACAAACGACCGTTAATGTCCGCGGTGTTAAAAGTATTGGACGGTTCTTTGGACGATGAGGCTAATTTGGACTATAATTTCACGAACCCAACTCCTTATGTATCTAGAAATGCAAATATTGTTGAATCTATTCAGCCGACACCATCGACTTTATCGGGACCAAGGTGA

Protein

Gene

>Asa6G01988.1
ATGCTGCAACTAAACCCAAACTTGCTGTTCCTCTTCATCGCCGTCATCATCTGCTCTTCTTCTCTAAGTAGCAGTGCTCAGCTGCCTTTTGAAATCCCATCAGCAAATATATCGACGAAATGGATAAACAACGACCAGTCCATAAAACAGAACCGCATGTTTGATGACTATGTAATTGCAAGATCCATCCTCATAAGACGAACATATGGTCCAGCATTTATTTCTGTTTTCAATCAGAACAGTACAAATGGCTCAGAATTTGGCCCAGCATTTGGTTGTGGCTTTATCTGCACTACTGGATCATGCACTTCCTTTCTATTCTCCATCTTCATAGGTTACTTAAACCCAGAATGGAATGCCACCTCCCCACCAATAGTATGGTCAGCAAACCGTAGCTACCCTGTTCGGAGAAACGCCACGCTGGAATTTTCCAGAGACGGGGACTTGCTTCTACGCGATTCCGATGGCAGCCAAGTCTGGTCTACTAATACTTCTGGAAAGTCGGTGGTTGGTATGAAGTTGGAAGTCTCGTGCTTTACGATAACAAGAACCAAACTGCTTGGTCATCTCTTGATCACCCTACCGACTGTTGGGTTCTGGGCCAAACGCTGAGGCAGGGTCAACGTCTGACAGCTAACGTTTCTTTTGCTAATTCAACCCAAGGTCTGTTGTATCTTAGTATTGTTAGTGGTGGTTTCAAGGCATTTGTTGGTTCACAATTGTACTATGACAGTACTACCTTTAATCTTCCCACAAGACAAGAACAGCCTACTCATATTATGTTTAATAATGGCAGCTTAGAAACATATGCTGGATCGAGCAAACCTGTTCCATTTATATCGTTACCGAAAGCAAATTTGGTTCAGTATATGCAACTTGTTTACATGGGCCATTTGAGAATTTATGCGTGGAGTTCTACCGGGTGGACTTTCTTAAAGGATGTTTTCCAGGTTGCTTATAATGATTATGATGATTATTGTACATATCCCAATGTCTGCGGAGAGAATGGGATATGCTCCAGTGGACATTGTTCTTGTCCGGTTTCAGATGATGGCAGTATGAATTACTTTAAACCAGTCGATCATACAAATCCAAACCTTGGTTGCGTGCCATTTAACGCTCTTTCATGCAAATCAGCCAAAACACATCAACTTCTAACACTCTTCAATGTGTCTTATTTCTCTGTTGATCAAGGAGAAGCCCCGTACAGTAACAATTCAAATGCAGAAGCTTGCAAGCAAGCATGTTTGGCAGACTGTTCTTGCAAAGCTGCATTTTTTCAATATTATTATGAGTATAAAGATTTTGGAACGAACTGTTACTTGGAATACGAGTTGTACTCGTTGAACAACAATCTACCAAAATATTCCGGTATAAAATCATCTGCATTTATCAAAGTGCAATCATTTCCTACTACAAATACAACACCTAGAACAAACTCCACCAACTTTATACAAAGTAAAGTTAGTGTTAGTCTTATAGCTGGTGTTAGTGTCGCTTCTCTACTTGCTTTTATTCTTATCATTGCATGCGTCATAGCTTTTCTAAGGAGAAGATACAGTTATAGAGAAGCTGAGGATGTTGATGAATTTGCTATGACGTTATTACCTGGACTGCCTACAAGATTTGCGTTTGAAGATCTCAGGGTTGCTACTAACGACTTCTTACGAAAACTTGGAGAAGGTGGATTCGGTTCTGTTTTCGAAGGAACACTAACCGATGGCACTAATATAGCCGTTAAAAGATTAGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCTGAGGTTGAAACCATTGGTAGTATTCATCATGTACATTTGGTGAGATTAATTGGATTTTGTGCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCACTTGataaatggattttctacaaaGATCATGATTTTGTTATAGATCGGCAAACAAGACGTAGTATCATAAATGATATAGCAAAGGGATTGACATATTTACATGAAGATTGCAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTCTTGAACGAGAATTTCAATGCTAAAGTATCAGATtttggattagcaaaacttatcaaTCGAGACCAGATCGAAGTAGTTACAAGAATGAGAGGCACGCCTGGATATTTAGCGCCGGAATGGTTGACATCGGTTATTACCGAAAAAGTGGATGTCTTTAGCTTTGGTGTCGTGGTGCTTGAAATTGTACGTGGAAGAAGGAATTTAGATTACTCAAAAGATGAAGAAAGCTTTCATTTAGTTAGTCTCTTGCAAAGAAAAGTTATAGAAAACAAGTTAGTGGATATGGTTGATTGTCGTTGCACTGATATGCAGAATCATATCGATGATGTTACAGAGATTATTCATCTTGCAATGTGGTGTCTACAGGGTGATAGTAACAAACGACCGTTAATGTCCGCGGTGTTAAAAGTATTGGACGGTTCTTTGGACGATGAGGCTAATTTGGACTATAATTTCACGAACCCAACTCCTTATGTATCTAGAAATGCAAATATTGTTGAATCTATTCAGCCGACACCATCGACTTTATCGGGACCAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008791435.1	1.0e-211	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	Q8RWZ5.1	7.8e-100	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A8N4F5E6	4.9e-208	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	35.71	6e-106	382	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G01988	AT4G32300.1	742	390	20	90	773	54	766	35.71	6e-106	382
Asa6G01988	AT1G34300.1	548	330	10	234	773	231	758	34.67	2e-80	297
Asa6G01988	AT4G00340.1	702	380	24	125	773	103	761	32.19	4e-80	296

Ortholog group

Species	Genes
Allium cepa	g473876.t1
Allium fistulosum	AfisC6G00048
Allium sativum	Asa0G03436.1; Asa6G01779.1; Asa6G01988.1; Asa7G06095.1; Asa8G00042.1; Asa8G05446.1; Asa8G05978.1; Asa8G05979.1; Asa8G05990.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	125	168	34.8	1.2e-08
PF00069.22	Pkinase	Domain	505	769	174.3	2.7e-51

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network