Detail information of Asa6G02241


Location
GeneChrStartEndStrand
Asa6G02241chr6580558609580574616+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250651.11.3e-140homeobox protein LUMINIDEPENDENS
SwissprotQ38796.21.3e-89Homeobox protein LUMINIDEPENDENS
trEMBLA0A1R3L5N51.3e-139Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G02560.147.929e-60 229LDHomeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag184970.t1
Allium fistulosumAfisC2G01135; AfisC2G04677
Allium sativumAsa6G02241.1
Arabidopsis thalianaAT4G02560.1; AT4G02560.2
Oryza sativaLOC_Os01g70810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08711.8Med26Domain45649326.15.8e-06

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006351Ptranscription, DNA-templated
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17552PPP1R10; protein phosphatase 1 regulatory subunit 10EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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