Detail information of Asa6G02363


Location
GeneChrStartEndStrand
Asa6G02363chr6608365866608371822-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020551433.11.0e-16ubiquitin-like-specific protease 1D isoform X1
SwissprotQ2PS26.13.3e-15Protein OVERLY TOLERANT TO SALT 1
trEMBLA0A8M8V5U47.5e-17ubiquitin-like-specific protease 1D isoform X4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G60220.164.152e-1680.9OTS1;ULP1DUB-like protease 1D

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag224189.t1; g70919.t1
Allium fistulosumAfisC3G05003
Allium sativumAsa2G04218.1; Asa2G05009.1; Asa3G03324.1; Asa6G02363.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g53630.1; LOC_Os12g41380.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02902.16Peptidase_C48Domain14638.11.3e-09
PF04770.9ZF-HD_dimerFamily537522.30.00011

Gene Ontology
AccessionOntologyName
GO:0008234Fcysteine-type peptidase activity
GO:0006508Pproteolysis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16287ULP1C_D; ubiquitin-like-specific protease 1C/DEC:3.4.22.68 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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