Detail information of Asa6G02400


Location
GeneChrStartEndStrand
Asa6G02400chr6613729328613782350+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246016.12.2e-227LOW QUALITY PROTEIN: lysM domain receptor-like kinase 3
SwissprotA0A0P0XII1.12.2e-179LysM domain receptor-like kinase 9
trEMBLA0A5P1E7P01.3e-213Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G21630.155.040.0 639AtCERK1;AtLYK1;CERK1;LYK1;LYSM RLK1chitin elicitor receptor kinase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag1039.t1; g235354.t1; g271431.t1; g27304.t1; g279802.t1; g300907.t1; g302680.t1; g316765.t1; g316766.t1; g33059.t1; g378422.t1; g383008.t1; g393291.t1; g481938.t1; g521281.t1; g530779.t1; g86512.t1
Allium fistulosumAfisC2G04837; AfisC8G02748
Allium sativumAsa1G02497.1; Asa1G02498.1; Asa6G01365.1; Asa6G01366.1; Asa6G02400.1; Asa6G02401.1
Arabidopsis thalianaAT3G21630.1
Oryza sativaLOC_Os08g42580.1; LOC_Os08g42580.4; LOC_Os09g33630.1; LOC_Os09g33630.2; LOC_Os09g33630.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01476.17LysMDomain9213716.60.0059
PF07714.14Pkinase_TyrDomain309576154.13.7e-45

Gene Ontology
AccessionOntologyName
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0005524FATP binding
GO:0006468Pprotein phosphorylation
GO:0016998Pcell wall macromolecule catabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13429CERK1; chitin elicitor receptor kinase 1EC:- Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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