result

Gene information

Detail information of Asa6G02812

Location

Gene	Chr	Start	End	Strand
Asa6G02812	chr6	718302641	718303780	-

Sequences

CDS

>Asa6G02812.1
ATGCTTTATGTAATGGATGACCTTAAATCCGACGTTGGCACCGACTATCCACCGAACCAGACCGCTCAGTTTCCCCCAGATTACAAATCCGATCCCGACGAAGAGGAATCCAATAACTCAATCGACAATCCAAACACAAACGATGAAGAAAACTCTAACGATGACGAATCCTCGTTAGAAAGCCGAGGAAAGCGAAGAAAGCTTGACAATTTCGAATTCGTTCAGAGGAAGCCACTTCCTTTACCAATCTCTAGCTGCAAATCGCCAATTGTGAAAAATTCGCCGCCTGATTGGTCGGAAGACTACACCTTCTTGCTTCTAGAAGCCTGGGGAGATCTATTTGTGAAAAACGGCCGGAAATCCCTTCGTTCTGATGAGTGGAGCGAAGTTGCCACTCGTGTCAATCAGGATTCTAGGATCATTCGATCTGATTCACAGTGTAGGAATAGGCTGGACACTTTGAAGAAGAAATACAAAAAAGAGAAGGCAAGGATGGTGGAGGATCCTAATTATAAAAGTGACTGGATTTATTTTGAAAAGATGGATTCCTTGATATCAAGTGCATTGGCAATTCCTGCGCCAACAAAAAGAAATGTTAGTGCCGGTGTAAGTGTTAATACGAGCATGAACTCAGGGTCGCCTTTGAGATTGGGATGTGGAGTGGATGCAGGAGAGTATGTTTTTGCAAATAACAAGGTGTATATGAACCGGACGAATGCAATGGATGAAATGAGAGACAGCCCAGGTGACACAGGTAGTGAAAACGATGATGATGAGGATGACGATGAAGACGATGATGGGTTGCCACCACCTACTAATATCAATGGCACTAGTAACAGTAAGATTGGGATTGGTTCCTCACTAAATATACTGGCGGATTCAATTAAGAGGGTTGGGGAGGTTTATGAGAGAATTGAAAATAAGAAGAGGGAGCAAATGATGGAGATAGAAAAGATGAGGAAAGAGTTTCTCAGGGAATTAGAGATGCAAAAAAGGCAGATACTTGAAAGGGCACAAGTTGAAATTGCAAGTATGAGGCATGAAGAAGAAGAAGAAGATGGCGATGACGATGAAGACGATGATGATAGGATGGTTGTGGGGAATGACGACGACGAGTCAGATGAGAAAATGAGCAGCTGA

Protein

Gene

>Asa6G02812.1
ATGCTTTATGTAATGGATGACCTTAAATCCGACGTTGGCACCGACTATCCACCGAACCAGACCGCTCAGTTTCCCCCAGATTACAAATCCGATCCCGACGAAGAGGAATCCAATAACTCAATCGACAATCCAAACACAAACGATGAAGAAAACTCTAACGATGACGAATCCTCGTTAGAAAGCCGAGGAAAGCGAAGAAAGCTTGACAATTTCGAATTCGTTCAGAGGAAGCCACTTCCTTTACCAATCTCTAGCTGCAAATCGCCAATTGTGAAAAATTCGCCGCCTGATTGGTCGGAAGACTACACCTTCTTGCTTCTAGAAGCCTGGGGAGATCTATTTGTGAAAAACGGCCGGAAATCCCTTCGTTCTGATGAGTGGAGCGAAGTTGCCACTCGTGTCAATCAGGATTCTAGGATCATTCGATCTGATTCACAGTGTAGGAATAGGCTGGACACTTTGAAGAAGAAATACAAAAAAGAGAAGGCAAGGATGGTGGAGGATCCTAATTATAAAAGTGACtggatttattttgaaaagatggATTCCTTGATATCAAGTGCATTGGCAATTCCTGCGCCAACAAAAAGAAATGTTAGTGCCGGTGTAAGTGTTAATACGAGCATGAACTCAGGGTCGCCTTTGAGATTGGGATGTGGAGTGGATGCAGGAGAGTATGTTTTTGCAAATAACAAGGTGTATATGAACCGGACGAATGCAATGGATGAAATGAGAGACAGCCCAGGTGACACAGGTAGTGAAAACGATGATGATGAGGATGACGATGAAGACGATGATGGGTTGCCACCACCTACTAATATCAATGGCACTAGTAACAGTAAGATTGGGATTGGTTCCTCACTAAATATACTGGCGGATTCAATTAAGAGGGTTGGGGAGGTTTATGAGAGAATTGAAAATAAGAAGAGGGAGCAAATGATGGAGATAGAAAAGATGAGGAAAGAGTTTCTCAGGGAATTAGAGATGCAAAAAAGGCAGATACTTGAAAGGGCACAAGTTGAAATTGCAAGTATGAggcatgaagaagaagaagaagatggcgATGACGATGAAGACGATGATGATAGGATGGTTGTGGGGAATGACGACGACGAGTCAGATGAGAAAATGAGCAGCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244889.1	8.5e-76	trihelix transcription factor ASIL2-like
Swissprot	Q9SYG2.1	2.5e-16	Trihelix DNA-binding protein ASIL1
trEMBL	A0A5P1FDY9	1.2e-71	Myb_DNA-bind_4 domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G24490.1	41.47	5e-50	195		Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G02812	AT3G24490.1	258	115	2	97	354	89	310	41.47	5e-50	195
Asa6G02812	AT3G58630.1	290	169	8	82	346	10	294	31.38	7e-28	121
Asa6G02812	AT1G54060.1	274	153	9	98	351	94	356	32.85	6e-20	95.5

Ortholog group

Species	Genes
Allium cepa	g190513.t1; g257348.t1; g45509.t1; g457184.t1
Allium fistulosum	AfisC5G06285
Allium sativum	Asa3G03240.1; Asa5G03529.1; Asa6G02812.1; Asa8G01838.1
Arabidopsis thaliana	AT3G24490.1
Oryza sativa	LOC_Os01g52090.1; LOC_Os01g52090.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13837.3	Myb_DNA-bind_4	Domain	97	184	71.4	5.4e-20

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09903	pyrH; uridylate kinase	EC:2.7.4.22	Pyrimidine metabolism	ko00240

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network