Detail information of Asa6G02841


Location
GeneChrStartEndStrand
Asa6G02841chr6726496570726497660+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA55688.18.7e-36GATA transcription factor 9
SwissprotQ9SV30.14.1e-30GATA transcription factor 8
trEMBLA0A7I8ICZ14.8e-36GATA-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32890.136.472e-33 139GATA9GATA transcription factor 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag380862.t1
Allium fistulosumAfisC2G05361; AfisC4G04336
Allium sativumAsa6G02841.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain20724057.85.5e-16

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17894GATA2; GATA-binding protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.