Detail information of Asa6G02890


Location
GeneChrStartEndStrand
Asa6G02890chr6740331471740339326+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241391.12.6e-41homeobox-leucine zipper protein HOX6-like
SwissprotP46897.23.1e-23Homeodomain transcription factor ATHB-7
trEMBLA0A199USG58.3e-29Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46680.159.297e-34 140ATHB-7;ATHB7;HB-7homeobox 7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag100268.t1; g151900.t1
Allium fistulosumAfisC2G05471; AfisC3G07180
Allium sativumAsa6G02890.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain6111660.21.1e-16
PF02183.15HALZFamily11815849.04.6e-13

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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