result

Gene information

Detail information of Asa6G03088

Location

Gene	Chr	Start	End	Strand
Asa6G03088	chr6	789737984	789739959	+

Sequences

CDS

>Asa6G03088.1
ATGGGTTGTTTTGGTTTATACAAAGCGAATTCCAAAAGGAACCAGGAACGAAAATCTGCAACAAATTCTGCACCTGTATCAACTGATTCATATACGAGTAGTGGAAAGCAAACCACTAGCAAATCTTCAGGTTCGACTTCATCACAACAAAGCGTTAGTGCTTTGTATGAAGAGAGAGCAAATAAACTTAGAGTGTTCCAGTTGAATGAGTTGATAGATGCTACTAATGGTTTCAATAGAATGCTTAAAATTGGAGAAGGGGGATTTGGTAGTGTTTATAAAGGATTAATTACGCCTTTAGATGGCAGTTGTGATAAGATTTCTGTTGCAATTAAGAGATTGAATCAAAAGGGTTTGCAGCAGGGACATAAAGAATTTCTAGCTGAAGTTCAATTTCTTGGAGTGGTAAATCATCGGAACCTTGTTAAACTAATAGGATACTGTTCTGAAGATAATGAAAATGCAATACAAAGGCTTCTAGTATACGAATTCATGCCAAATAAGAGTTTAGAAGACCATCTATTTAGTCGAGCACATCCTTGTATTCCATGGAATGTGAGGCTTCAGATTGCATTAGGGGCTGCTGAAGGTTTGGCTTACTTGCACGAGGGCCTGGAAGTTCAGGTAATTTATAGGGATTTCAAAGCCGCGAATGTACTACTGGATAAGGAGTTCAAACCTAAGCTTTCTGACTTCGGATTAGCAAGGGAAGGACCCGTGGATGGAAGGTCTCATGTATCCACAGCGGTTGTTGGCACGTATGGATATGCAGCGCCCGACTACATAGAGACAGGCCATCTAACTACGAAGAGCGATGTATGGAGCTTCGGTGTAGTGCTATATGAACTTCTTACAGGCAGGCGGTCTTTGGAACGAAGCCGACCGGTCAATGAGCGGAAGCTTATAGAATGGGTGAAGCAATTTCCTATAGAGAGTCGAAGATTCAACATGATAATGGATCCTAGGCTACAATATCAGTTCTCTCTAAAGTCTGCTAGGGAGATTGCAAAACTAGCAGACAAATGCCTTGCTAAGCAAGCTAAAGACAGACCAAAGATGAGTGAAGTGGTTGAGAGCTTAAAACAAATTATAAAGATCAAGGATGTTTCTGGGTCGGCAGAGATGCCTAGAAGATGA

Protein

Gene

>Asa6G03088.1
ATGGGttgttttggtttatacaaagcgaATTCCAAAAGGAACCAGGAACGAAAATCTGCAACAAATTCTGCACCTGTATCAACTGATTCATATACGAGTAGTGGAAAGCAAACCACTAGCAAATCTTCAGGTTCGACTTCATCACAACAAAGCGTTAGTGCTTTGTATGAAGAGAGAGCAAATAAACTTAGAGTGTTCCAGTTGAATGAGTTGATAGATGCTACTAATGGTTTCAATAGAATGCTTAAAATTGGAGAAGGGGGATTTGGTAGTGTTTATAAAGGATTAATTACGCCTTTAGATGGCAGTTGTGATAAGATTTCTGTTGCAATTAAGAGATTGAATCAAAAGGGTTTGCAGGTATAGTACTTCTTTTTTAATTTATCATCGTTCTTCCATTTTTCCCTGTGAAATATAATATGTGATAACTTGTCTCAATTGATCCTTTTCATTTCCAACAGCTCCAGCCAGAAATTAACACCAGTCCGTTGTAAATTTCATAAATATAGGATTAATTCCATATAAAATTCAAACATGCACGAGCTAGCTACTGTGTGGGCTAACTGATTATATTTGTTAGCGTAAATTTCACTAATTGTATATAGTTAATTGATCCTTGTCTAATGGATTCAGAATATGATAGTTAACCTTCtgtgtttatttgtttgtcttcTTGGTTGGATGAAAGTGGTGCAAAACAAATGTATTAAATAAAGCAATATGCAAACTTAATTGCAGAAGGCATTTGACTAGGAGTATTATATTGTTGCTAACCTAATGGCAAATGGCATTTGACTACGACTTAACAAGTAATAATTGCACTTTTactaacattttttttctaatatgTATGATGTATCATTAATGTGATAGTTAGGACATAGGACAACAATATAGATAAGAGaactagttaatttatttattattatttttttttttcatgtatgcCACTTATCATACATAGTAAAATATACATCTAATATTCAAGTGATATCGGTATGATTCATCTTAAGCAGGGACATAAAGAATTTCTAGCTGAAGTTCAATTTCTTGGAGTGGTAAATCATCGGAACCTTGTTAAACTAATAGGATACTGTTCTGAAGATAATGAAAATGCAATACAAAGGCTTCTAGTATACGAATTCATGCCAAATAAGAGTTTAGAAGACCATCTATTTAGTCGAGCACATCCTTGTATTCCATGGAATGTGAGGCTTCAGATTGCATTAGGGGCTGCTGAAGGTTTGGCTTACTTGCACGAGGGCCTGGAAGTTCAGGTAAACCTGCATGTCGATATAGCAGAGAACATACACTTCATATATATACAACTCATTTGTATATCTTGACCTGAACATTTGTGCATTTGATGATAGGTAATTTATAGGGATTTCAAAGCCGCGAATGTACTACTGGATAAGGAGTTCAAACCTAAGCTTTCTGACTTCGGATTAGCAAGGGAAGGACCCGTGGATGGAAGGTCTCATGTATCCACAGCGGTAATTTTGTTTTGAGAACTTAACAAGAAgcatttcatttaattttttcttgAGCAAAGCAGCAACAAAAATGTTGGTTTATGTTCATAGGTTGTTGGCACGTATGGATATGCAGCGCCCGACTACATAGAGACAGGCCATCTAACTACGAAGAGCGATGTATGGAGCTTCGGTGTAGTGCTATATGAACTTCTTACAGGCAGGCGGTCTTTGGAACGAAGCCGACCGGTCAATGAGCGGAAGCTTATAGAATGGGTGAAGCAATTTCCTATAGAGAGTcgaagattcaacatgataatggATCCTAGGCTACAATATCAGTTCTCTCTAAAGTCTGCTAGGGAGATTGCAAAACTAGCAGACAAATGCCTTGCTAAGCAAGCTAAAGACAGACCAAAGATGAGTGAAGTGGTTGAGAGCttaaaacaaattataaagatCAAGGATGTTTCTGGGTCGGCAGAGATgcctagaagatga

Functional annotation

Database	accession number	e-value	annotation
nr	ONK59153.1	7.2e-152	uncharacterized protein A4U43_C08F3530
Swissprot	Q9LTC0.1	2.8e-108	PBS1-like protein 19
trEMBL	A0A8B7MTQ1	1.1e-141	probable serine/threonine-protein kinase PBL19

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47070.1	56.84	1e-116	416		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G03088	AT5G47070.1	380	145	6	1	368	1	373	56.84	1e-116	416
Asa6G03088	AT2G28940.2	351	145	6	19	364	44	391	56.41	4e-108	388
Asa6G03088	AT3G09830.2	382	186	4	1	375	1	380	48.95	9e-108	387

Ortholog group

Species	Genes
Allium cepa	g227043.t1; g259345.t1; g422791.t1; g86649.t1
Allium fistulosum	AfisC1G00235; AfisC1G08244; AfisC2G05688; AfisC4G02514
Allium sativum	Asa4G01972.1; Asa6G03088.1; Asa7G00662.1; Asa7G06582.1; Asa7G06589.1
Arabidopsis thaliana	AT4G17660.1; AT5G47070.1
Oryza sativa	LOC_Os02g43430.1; LOC_Os04g45920.1; LOC_Os06g50100.1; LOC_Os07g31290.1; LOC_Os09g36320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	83	360	168.5	1.5e-49

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network