Detail information of Asa6G03269


Location
GeneChrStartEndStrand
Asa6G03269chr6845892482845896952+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008789526.16.1e-35helicase-like transcription factor CHR28 isoform X2
SwissprotQ94BR5.12.9e-34Protein SNF2-RING-HELICASE-LIKE 2
trEMBLA0A8B7C1644.4e-35helicase-like transcription factor CHR28 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G50410.161.683e-36 147SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag379923.t1
Allium fistulosum
Allium sativumAsa5G03200.1; Asa6G03269.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily1212989.81.3e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15173TTF2; transcription termination factor 2EC:3.6.4.- Thyroid hormone synthesisko04918

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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