result

Gene information

Detail information of Asa6G03773

Location

Gene	Chr	Start	End	Strand
Asa6G03773	chr6	995159132	995161888	-

Sequences

CDS

>Asa6G03773.1
ATGGGAAATTGCTTGGATTCTTCTTCATCTTCAGTTCAGAATGTTCAAAGCTCTAATCAACCTTCAGGTGCTTCAAAATTTGGGAGCAAATCAAACCTATCTTCGATTCGTTCCTCTCAAACATTTTCAAATCCATCTACATTTACAGCGCCTTCTACAAATGAAAGTCGTAATCTAGAAATTCCTCCTACACCAAGAACTGAAGGAGAAATACTGTCTTCATCTAATGTGAAGCCATTCACATATAGCGAACTTAAAAGTGCAACACGAAATTTCAGACCTGATGGCCTAATAGGTGAAGGAGGATTTGGCTTTGTATATAAAGGTTGGATTGATGAATATACTTTAGCTCCATCAAAGCCTGGATCCGGTATGATTGTTGCTATCAAAAAGCTTAAACCTGAAGGTTTTCAGGGTCATAAAGAGTGGCTGACAGAGGTTGAGTATCTTGGTCAGCTTTCGCATCCAAACTTAGTTAAGCTCATAGGGTATTGTTTGGATGGTGATAACCGCCTTTTGGTTTATGAATACATGCCTAAAGGAAGTTTGGAGAATCATTTGTTTAGAAGAAGTTCACAGCCACTTTCGTGGGCAACTAGGATGAAAGTGGCCATAGGAGCTGCCAGAGGATTCACATTTTTGCACGATGGTGAATCCCAAGTTATATTTCGAGATGTTAAGGCTTCAAATATTCTTCTTGACTTGGATTTTAATCCAAAGCTTTCAGATTTTGGATTGGCAAAAGCTGGTCCAACCGGAGATAATACACACGTATCTACACAAGTGATGGGAACTCAAGGTTACGCTGCTCCAGAATATGTTGCCACAGGTCGGCTATCAGCAAAAGCAGATGTATACAGCTTTGGTGTGGTGCTTTTGGAAATGCTTTCAGGGCGGCGAGCCCTTGATAAGAATAGAACACTAGCAGAGCAAAACCTAGTAGATTGGTCTAGACCTATTCTCAGAGACAAGAGAAAGCTGTACAAAATAATGGACCCAAGATTGGAGAGTCGGTACTCGAAGAAATCAGCGCATATAGTAGCCAAACTTGCATTGGATTGCATCAACAATGAAGCTCGGTTTAGACCTAAAATGTCTGAGGTGTTAGCAGCACTCGAACCACTTCTGGACCCAAAATAA

Protein

Gene

>Asa6G03773.1
ATGGGAAATTGCTTGGATTCTTCTTCATCTTCAGTTCAGAATGTTCAAAGCTCTAATCAACCTTCAGGTTATCTCTTTTATTCTCACTGCTACGTTTTACTATAGCTTTATTCCATAAAGTTTAATTTTTGTTGCTTGAAAACGATAAAGTGCTCGTTTTGTTATTGTCTTATTGATTGTTTTGATTGATATGTTACTTCCATGCGCGAAATGAAAAGTAGAAAAAGTTAGTTGACTCCTTTTATTGATTGCCTTTTAATTTTGTTGGCTTCCCATCTCAAATATTTGTTGCATTTTTTTTATGAATCAACTTTAAAATTTTGTGAAAAGCTTGGTGTAAGATTCGATGACTTGAGGTTTGATGGTAGGAATTGTTCGTAATAAATGTGATTGTATATTGTTATGCTTATGGTTTATGTCTTAGAAAAACAATAATAACTTCTAAGTTACTCTTTTATCATTTATATGTATGTTTAAGAAGAATTTAAACCCTTCAAAACTCGTGAGTAACTAGAAACATTTCCTTTTGTTCTAAAATTCTGCAGGTGCTTCAAAATTTGGGAGCAAATCAAACCTATCTTCGATTCGTTCCTCTCAAACATTTTCAAATCCATCTACATTTACAGCGCCTTCTACAAATGAAAGTCGTAATCTAGAAATTCCTCCTACACCAAGAACTGAAGGAGAAATACTGTCTTCATCTAATGTGAAGCCATTCACATATAGCGAACTTAAAAGTGCAACACGAAATTTCAGACCTGATGGCCTAATAGGTGAAGGAGGATTTGGCTTTGTATATAAAGGTTGGATTGATGAATATACTTTAGCTCCATCAAAGCCTGGATCCGGTATGATTGTTGCTATCAAAAAGCTTAAACCTGAAGGTTTTCAGGGTCATAAAGAGTGGCTGGTACtacattttttgttttcttaataaaaataaacaacttaaaattgtatttgtatatctttattttattttagttgattAAATCTAGTTAATTATTCATTGCAGACAGAGGTTGAGTATCTTGGTCAGCTTTCGCATCCAAACTTAGTTAAGCTCATAGGGTATTGTTTGGATGGTGATAACCGCCTTTTGGTTTATGAATACATGCCTAAAGGAAGTTTGGAGAATCATTTGTTTAGAAGTGAGTTTGAGTATGCCATTAGATATCTTCTATATATAGTTCATCCTTCAGACCAACCCCAACGCGGGGTTGGTCAGTGGGCAACTGACCCCCAACGCGGGGTCAGTTGCCCACttgggggttgctttggcaacccccaaggttgccaaagcaaccggGTCGGTTGCTTTGGTTGCAACctttagccggcttatttaaagccggctaaaggtagccggctttaaataagctgGTTAAGGGTTTGGGGGAAATTTATCTCCCCTccttatccggcttttataaagccggataaggGGTGTGGTGTGGCTTGATTTCCACACCACACCACGGATTGCAATCGGACGGTTGTCTGATTGCAATCCACGTAATAccttatccggctttataaaagccggataaggTATTACAAGCAACTCACCCGTgctgattggatggatttgacaaATCCATCCAACCAGCGTTGGGGATGCTCTCATAACATATATACTTCATCTGGAAACATGTTGTGCAACTTTATGATACATTATACTTACTACAGTTTTAGTACAGCAATTACGATTAATATAGACTAAGCATGAGATTGTGATTAAATTTTATAGGAAGTTCACAGCCACTTTCGTGGGCAACTAGGATGAAAGTGGCCATAGGAGCTGCCAGAGGATTCACATTTTTGCACGATGGTGAATCCCAAGTTATATTTCGAGATGTTAAGGCTTCAAATATTCTTCTTGACTTGGTACATCATTCTTTTCTGGTTTGATATCTCATATCTCTAACTAAGTTCTCCAAATTACTTCATTTTTACAAAGTTTTTGGGTGCAGGATTTTAATCCAAAGCTTTCAGATTTTGGATTGGCAAAAGCTGGTCCAACCGGAGATAATACACACGTATCTACACAAGTGATGGGAACTCAAGGTTACGCTGCTCCAGAATATGTTGCCACAGGTATATATTCTTGCTGAACGCTTCTTTTCTTCAATCatgttttattatttctatttctttacaAATGCCAAGATTATATTAATCATAATGGATCCCGTATGAACACCAAGAAATCATTCTTTATACAGCCAATTGGTTTTGTAACGATAACCCATTCTTTAATATCGCAATAGAAGAATGATTAAATTCGTGAACACTTAGCCCGACTTAAGATATGGCACACATCAAGTGATTTGTTAAGAATAGTCTTATATCGGGAGATTTATAATAGTAATGGATGAATTAAATTTTCAGCTGGTTTCTtgataataaatagttattatttgGCCATTCTTGGAAACTATTTTAGGTCGGCTATCAGCAAAAGCAGATGTATACAGCTTTGGTGTGGTGCTTTTGGAAATGCTTTCAGGGCGGCGAGCCCTTGATAAGAATAGAACACTAGCAGAGCAAAACCTAGTAGATTGGTCTAGACCTATTCTCAGAGACAAGAGAAAGCTGTACAAAATAATGGACCCAAGATTGGAGAGTCGGTACTCGAAGAAATCAGCGCATATAGTAGCCAAACTTGCATTGGATTGCATCAACAATGAAGCTCGGTTTAGACCTAAAATGTCTGAGGTGTTAGCAGCACTCGAACCACTTCTGGACCCAAAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257329.1	2.3e-166	probable serine/threonine-protein kinase PBL3 isoform X1
Swissprot	O49840.1	1.6e-143	Protein kinase 2B
trEMBL	B9S298	1.2e-151	Protein kinase APK1A, chloroplast, putative

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G02800.1	68.27	9e-147	516	APK2B;Kin2	protein kinase 2B

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G03773	AT2G02800.2	375	110	2	1	375	1	366	68.27	9e-147	516
Asa6G03773	AT2G02800.1	375	110	2	1	375	1	366	68.27	9e-147	516
Asa6G03773	AT1G14370.1	375	123	2	1	375	1	369	65.60	5e-140	494

Ortholog group

Species	Genes
Allium cepa	g154856.t1; g504071.t1
Allium fistulosum	AfisC4G02191; AfisC4G02192; AfisC7G02075
Allium sativum	Asa3G03186.1; Asa3G03187.1; Asa6G03772.1; Asa6G03773.1
Arabidopsis thaliana	AT2G02800.1; AT2G02800.2
Oryza sativa	LOC_Os03g07430.1; LOC_Os03g07430.2; LOC_Os03g07430.3; LOC_Os03g07430.4; LOC_Os03g07430.5; LOC_Os10g26520.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	98	371	155.1	1.8e-45

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network