result

Gene information

Detail information of Asa6G03793

Location

Gene	Chr	Start	End	Strand
Asa6G03793	chr6	1001458759	1001461541	+

Sequences

CDS

>Asa6G03793.1
ATGCTCATCAATCTCAGCGATATTCGCTGTGCGCTCTGTCTCTTAGCCAAAGAACCAATTTTTGAGCACATGGGTGTTAAAATGCTGACCTTTGGGCTCAATTTCTCGATCCAAGTTCTAATCTTGACCACTTTTTTCAACTCGACAACACTCAAAGTCTCGTCCCTCGGCTCCATGAACTCAATCGCCGTCTCCTACGGCGAAAACGGGCCCGCTTTCTGCGTTCTTCTCTCGGACGGATCCCACTCGGTCCAGTGTCTAGGATCCGATAACTCAGTGGTATACGGAGCTCCGCAGAGAATCCCATTCTCAGGCCTTACAGCCGGGGACAGCTTCGTGTGCGGGCTTCTCCTAAACTCGAAGCAGCCTTATTGCTGGGGAAGCAACTTCTACGTCAAAATCGGCGTTCCTCAACCCATTCTCGAGTCCACTGCCTACTCCACGATCAGCGCTGGAGACAATCACTTGTGCGCTCTGAGAATCCCAACAAAAGAAAACGCCACAAACTCCATAATTGATTGCTGGGGCTACAACATGACTTCTACACATGTTTACAGTTCTAAAGTGTCATCAATAACTACAGGTTCCTCCTTCACTTGTGGTCTCTACGACTCCAATTTATCAGTCTTCTGCTTTGGAGATGAAACTGGAAGCAACGTAGTGAGTTTAATCCCTAGAGCTTTGAACTTCCAATCCATTTCAGCAGGTGGGTTTCATGTGTGCGGAGTATTACTGAACTTTCAAGTTTATTGCTGGGGCAAGAATGTAGGAGTAAGCAGAGATGATATACAACATGCTCCAATGGATTCTATGGTATCTTTAGTAGGTGGTAAGTTTCATTCATGTGGGATCAAAACAAGTGATAGAGGAGTTATATGCTGGGGTTTAGCTCTGCCTAACAGCTTACCACCTCCGAAAGGGATTAAAGTGTACGCCATGGCAGCAGGCGATTATTTCACTTGCGGCATTGCTGCAGATATATCGTTAACTCCTCATTGCTGGGGAGCAGGTGGCCCTTGGAACTTACCTGTAGCCGCCTCTCCTAGTGTTTGCACCGAGCATAAGTGTAGTTTAGGGTTCTTCGAATATAGCCGCGTGCTTTGCAAGTCTTTGAATTCTAGGCTTTGCCTGCCTTGTAGCAATGAATGCCCTATCGGAATGTACCAAACGTCTTCATGCAATGGCACTTCTGACAGCATTTGCCAGTTCAACTGCAGTGCATGTCACTCTAGTGAATGCTTCTCGTTTTGTTCATCGCATATGGCTAGAACTTGGAGAGTTTATCTTGGAGAAATAGCGTTTGCAGTTGTATTGGTGGTTGTAATAACATCTATCGCGTTCACTTACGTGAGATGCAAGTTAAGGAAATGCAGTTGTTCTAGAACTGGAGCTAAGGAAGGAGTAATCAAAAGTGGTGCTTTTCACAAAGAGCTTAAAATACAAAGAGCTCGAATGTTTACTTATAAGGAGTTGGAGGAGGCGACGGGTGGGTTTAAAGAAGAGTCCTTGGTGGGAAAAGGAAGCTTCTCATGTGTTTTTAAAGGAGTTTTGAAAGACGGAACCATAGTCGCTGTAAAGAGATCTATAGTGGTGTCGTCGGACATACGGAAGAATTCTAAAGAATTCAAAACGGAACTTGACCTGTTGTCTAGACTTAACCATGCACATCTTTTAAGCCTACTGGGCTACTGTGAAGAAGGAGGAAAAAGGCTTTTGGTGTACGAGTTCATGGCGCATGGTTCATTATACCAACACTTGCATGGCAAAGACACTAGCCTTAAAGAAGAGATGAACTGGGTAAGAAGAGTGACGATCGCAGTTCAAGCGGCTAGAGGCATCGAATACCTGCATGGATATGCATGCCCTCCGGTCATTCACAGGGACATCAAGTCTTCGAACATACTGATAGATGAAGAGCACAATGCACGGGTTTCGGATTTCGGCCTTTCCCTCTTAGGCCCGACCGATAGCAACACTCCATTATCCGAACTGCCAGCTGGCACTCTAGGATATCTTGACCCTGAATATTACAGACTCCACTACTTGACGACGAAATCCGATGTGTACAGTTTCGGGGTGCTGCTTTTGGAAATTTTAAGTGGGAGGAAAGCGATAGACATGCAGTATGAAGAAGGTAATATAGTTGAATGGGCGGTGCCGTTGATCAAAGCAGGCGACATATTGTCCGTTTTGGACCCGGTTTTGAAACTGCCTTCCGACATTGATGCGCTTAACAAGATAGCGAACGTGGCATGCAAATGTGTTAGAATGAGAGGGAAGGATAGGCCTTCTATGGATAAGGTGACGACTTCATTAGAGAGGGCGGTGGCCATGTTAATGGGAAGTCCATGCAACGAGCAGCCGATTTTGCCGAGTGAAGTCGTGTTGGGAAGCAGTAGACTGCATAAGAAGACTAGTTCGCAGAGGTCGTCGAATCGGTTGGAGAATGAAATGGGCGAGTCGGATGATCAGAGAATTGAGTACAGGGCGCCTTCTTGGATTACTTTTCCGAGCGTTACTTCCTCGTCGAGGAGGAGGAAATCGTCTGCTTCGGACATGGATGGTGATGTGAAGTTCATTGAAGGAAGGAATTTGGGGAACAATAGCAATGTTGGAGACAGTTTGAGGTGTTTGGAAGAAGAAATTGGACCTGCTTCACCTAGGGAACATCTGTTCTTGCAGAATAACTTTTGA

Protein

Gene

>Asa6G03793.1
ATGCTCATCAATGTAAGTGCCTTAGCATCTTAATCACTATTTTGAATTCTGATCACTTTCTTAAATCCTTTCCATAGTTGACAATCAGTTCTTTTTACCAGCTCAGCGATATTCGCTGTGCGCTCTGTCTCTTAGCCAAAGAACCAATTTTTGAGCACATGGGTGTTAAAATGCTGACCTTTGGGCTCAATTTCTCGATCCAAGTTCTAATCTTGACCACTTTTTTCAACTCGACAACACTCAAAGTCTCGTCCCTCGGCTCCATGAACTCAATCGCCGTCTCCTACGGCGAAAACGGGCCCGCTTTCTGCGTTCTTCTCTCGGACGGATCCCACTCGGTCCAGTGTCTAGGATCCGATAACTCAGTGGTATACGGAGCTCCGCAGAGAATCCCATTCTCAGGCCTTACAGCCGGGGACAGCTTCGTGTGCGGGCTTCTCCTAAACTCGAAGCAGCCTTATTGCTGGGGAAGCAACTTCTACGTCAAAATCGGCGTTCCTCAACCCATTCTCGAGTCCACTGCCTACTCCACGATCAGCGCTGGAGACAATCACTTGTGCGCTCTGAGAATCCCAACAAAAGAAAACGCCACAAACTCCATAATTGATTGCTGGGGCTACAACATGACTTCTACACATGTTTACAGTTCTAAAGTGTCATCAATAACTACAGGTTCCTCCTTCACTTGTGGTCTCTACGACTCCAATTTATCAGTCTTCTGCTTTGGAGATGAAACTGGAAGCAACGTAGTGAGTTTAATCCCTAGAGCTTTGAACTTCCAATCCATTTCAGCAGGTGGGTTTCATGTGTGCGGAGTATTACTGAACTTTCAAGTTTATTGCTGGGGCAAGAATGTAGGAGTAAGCAGAGATGATATACAACATGCTCCAATGGATTCTATGGTATCTTTAGTAGGTGGTAAGTTTCATTCATGTGGGATCAAAACAAGTGATAGAGGAGTTATATGCTGGGGTTTAGCTCTGCCTAACAGCTTACCACCTCCGAAAGGGATTAAAGTGTACGCCATGGCAGCAGGCGATTATTTCACTTGCGGCATTGCTGCAGATATATCGTTAACTCCTCATTGCTGGGGAGCAGGTGGCCCTTGGAACTTACCTGTAGCCGCCTCTCCTAGTGTTTGCACCGAGCATAAGTGTAGTTTAGGGTTCTTCGAATATAGCCGCGTGCTTTGCAAGTCTTTGAATTCTAGGCTTTGCCTGCCTTGTAGCAATGAATGCCCTATCGGAATGTACCAAACGTCTTCATGCAATGGCACTTCTGACAGCATTTGCCAGTTCAACTGCAGTGCATGTCACTCTAGTGAATGCTTCTCGTTTTGTTCATCGCATATGGCTAGAACTTGGAGAGTTTATCTTGGAGAAATAGCGTTTGCAGTTGTATTGGTGGTTGTAATAACATCTATCGCGTTCACTTACGTGAGATGCAAGTTAAGGAAATGCAGTTGTTCTAGAACTGGAGCTAAGGAAGGAGTAATCAAAAGTGGTGCTTTTCACAAAGAGCTTAAAATACAAAGAGCTCGAATGTTTACTTATAAGGAGTTGGAGGAGGCGACGGGTGGGTTTAAAGAAGAGTCCTTGGTGGGAAAAGGAAGCTTCTCATGTGTTTTTAAAGGAGTTTTGAAAGACGGAACCATAGTCGCTGTAAAGAGATCTATAGTGGTGTCGTCGGACATACGGAAGAATTCTAAAGAATTCAAAACGGAACTTGACCTGTTGTCTAGACTTAACCATGCACATCTTTTAAGCCTACTGGGCTACTGTGAAGAAGGAGGAAAAAGGCTTTTGGTGTACGAGTTCATGGCGCATGGTTCATTATACCAACACTTGCATGGCAAAGACACTAGCCTTAAAGAAGAGATGAACTGGGTAAGAAGAGTGACGATCGCAGTTCAAGCGGCTAGAGGCATCGAATACCTGCATGGATATGCATGCCCTCCGGTCATTCACAGGGACATCAAGTCTTCGAACATACTGATAGATGAAGAGCACAATGCACGGGTTTCGGATTTCGGCCTTTCCCTCTTAGGCCCGACCGATAGCAACACTCCATTATCCGAACTGCCAGCTGGCACTCTAGGATATCTTGACCCTGAATATTACAGACTCCACTACTTGACGACGAAATCCGATGTGTACAGTTTCGGGGTGCTGCTTTTGGAAATTTTAAGTGGGAGGAAAGCGATAGACATGCAGTATGAAGAAGGTAATATAGTTGAATGGGCGGTGCCGTTGATCAAAGCAGGCGACATATTGTCCGTTTTGGACCCGGTTTTGAAACTGCCTTCCGACATTGATGCGCTTAACAAGATAGCGAACGTGGCATGCAAATGTGTTAGAATGAGAGGGAAGGATAGGCCTTCTATGGATAAGGTGACGACTTCATTAGAGAGGGCGGTGGCCATGTTAATGGGAAGTCCATGCAACGAGCAGCCGATTTTGCCGAGTGAAGTCGTGTTGGGAAGCAGTAGACTGCATAAGAAGACTAGTTCGCAGAGGTCGTCGAATCGGTTGGAGAATGAAATGGGCGAGTCGGATGATCAGAGAATTGAGTACAGGGCGCCTTCTTGGATTACTTTTCCGAGCGTTACTTCCTCGTCGAGGAGGAGGAAATCGTCTGCTTCGGACATGGATGGTGATGTGAAGTTCATTGAAGGAAGGAATTTGGGGAACAATAGCAATGTTGGAGACAGTTTGAGGTGTTTGGAAGAAGAAATTGGACCTGCTTCACCTAGGGAACATCTGTTCTTGCAGAATAACTTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263634.1	0.0e+00	serine/threonine-protein kinase-like protein CR4 isoform X1
Swissprot	Q75J39.1	0.0e+00	Protein CRINKLY 4
trEMBL	A0A5P1F5P2	0.0e+00	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G59420.1	58.16	0.0	1004	ACR4;CR4	crinkly4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G03793	AT3G59420.1	901	317	15	39	897	13	895	58.16	0.0	1004
Asa6G03793	AT3G09780.1	800	405	28	54	774	22	767	32.75	8e-98	355
Asa6G03793	AT2G39180.1	790	437	26	53	776	20	770	31.39	2e-94	344

Ortholog group

Species	Genes
Allium cepa	g415204.t1
Allium fistulosum	AfisC2G06367
Allium sativum	Asa6G03793.1
Arabidopsis thaliana	AT3G59420.1
Oryza sativa	LOC_Os03g43670.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	501	771	150.7	4.1e-44

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network