Detail information of Asa6G03811


Location
GeneChrStartEndStrand
Asa6G03811chr610073691301007402345+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009415093.14.0e-58PREDICTED: high mobility group B protein 15
SwissprotQ9MAT6.11.8e-39Nucleosome/chromatin assembly factor group D 15
trEMBLA0A804KBZ32.9e-58(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04880.146.323e-44 175HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag215544.t1
Allium fistulosumAfisC2G06387
Allium sativumAsa6G03811.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01388.18ARIDDomain3712173.21.9e-20

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003677FDNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11765ARID2; AT-rich interactive domain-containing protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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