Detail information of Asa6G04103


Location
GeneChrStartEndStrand
Asa6G04103chr611087962661108828690+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241627.10.0e+00LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3
SwissprotQ5FWF4.27.7e-82Endonuclease ZRANB3
trEMBLA0A8B7C6F50.0e+00DNA annealing helicase and endonuclease ZRANB3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G07810.151.450.0 709SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag194817.t1; g453958.t1
Allium fistulosumAfisC2G07590; AfisC2G07596
Allium sativumAsa6G04103.1
Arabidopsis thalianaAT5G07810.1
Oryza sativaLOC_Os07g40730.1; LOC_Os07g40730.2; LOC_Os07g40730.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily213445100.95.4e-29
PF00271.28Helicase_CFamily56466649.44.5e-13
PF01844.20HNHFamily1040107529.65.3e-07

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0004519Fendonuclease activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14440SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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