result

Gene information

Detail information of Asa6G04180

Location

Gene	Chr	Start	End	Strand
Asa6G04180	chr6	1127832340	1127834775	-

Sequences

CDS

>Asa6G04180.1
ATGGCTGCTGGTCGTTACCGTAGCAGTTATAGGAACCACGAGTACAGATCCCGAGAACTAGACTTGGATATTCCTATGAAAAGCGGTAGGTATGAAAAAATTGAACAAATTAGGGCAAAATATAGGGAGGAAGATTTGAGAGATGAAGTTTTGGTTAATGGCTTCTCTAGGTCTACGAAATTTGTCGAGCGTGAGCCCGGTGAGTTGTCTAGTGATGATGAGACCTTCCCTTATCCTCAAAATATGACTTCGATAACTGGGAAAAGGAAGTTTCCAACGGATGTTTCTGAAAGTAACGAATACAACGAAAGTAAAACTAGAAACGAAATGGATAAGGAGTTTATAAGTTTTGTTGAAACAGAAGAAAATATGGAGTTTGTGCCTGCTAGACATATATTATCTTCTAGGTGGGCTAACGAGAACGATAATGAGGAAGAAAATCCAACTGTTAAAGAAGTCATGTCCAAAAAGAAAAAAACTAGCCCTTTGGGATCGAATTCCGAGAAGACTTTATCAAAAAGTTGTAGTTCTAGTAGTAGCGCGAGTTATAATACGGACAGTAGCGATGAAAATGGTATAACAACAAAAAATAACTCTGATTCAGAAAAAAATGCGAATAATATAACAGAATTGGATTCTGAAAGACGTATTAACATGCTTCAAGGATGCAGGAATGTTAATGAATTTGAAAGGTTGAATAGAATCGATGAAGGTACCTATGGCGTTGTGTTTAGAGCTAGAGATAAGAAGAGTGGGGAAATAGTGGCGTTAAAAAAAGTGAAATTGGAGAAAGAAAGAGAGGGTTTTCCCTTGACTGCGCTAAGGGAGATTAATATTTTACTATCCTTTAACCACCCTTCTATTGTGGATGTGAAGGAAGTTGTTATGGGTGATATGAACAGTGTGTTCATGGTTATGGAGTATATGGAGCATGATCTTAAAGGTTTGGTGGAGAGCATGAAGCATCCATTCAGTCAGTCTGAAGTTAAATGTTTGATGCAGCAGTTGTTATTGGGTGTTGGCTATCTTCATGACAACTGGGTACTACACAGATCATCATCGTTGCTGCAGATTTTCAAAATTCTTGGTACCCCAAATAAGCGTATATGGCCAGGATTTGTTGATTTACCTGGAAGCAAAGCTAAATTTCTTGAGCAACCCTGTAACAAGCTTGGTGAAAAGTTTCGTCGGACGGCAGCATATACACCATTTACACCTACGGCAGTGACCACACGTCCAGTTCTTTCAGAATCTGGACTTGATCTGTTGAGCAGACTACTTACCTTCGATCCTGAAAAGAGGATAACAGCACAAGAGGCTCTTCATCATGACTGGTTTAGGGAAGTTCCTCTGCCGAAACCAAAAGAGTTAATGCCGACATATCCTGCTCAACATGCACAAGATAGGCGTCTGAGAAGAGTTATTAAGAGCCCAGATCCTCTAGAAGAGTTACGAATCAAGGAATTGCAGTCTGGAGCTGGAACTGGTGGATTATTTGGTTAA

Protein

Gene

>Asa6G04180.1
atggctGCTGGTCGTTACCGTAGCAGTTATAGGAACCACGAGTACAGATCCCGAGAACTAGACTTGGATATTCCTATGAAAAGCGGTAGGTATGAAAAAATTGAACAAATTAGGGCAAAATATAGGGAGGAAGATTTGAGAGATGAAGTTTTGGTTAATGGCTTCTCTAGGTCTACGAAATTTGTCGAGCGTGAGCCCGGTGAGTTGTCTAGTGATGATGAGACCTTCCCTTATCCTCAAAATATGACTTCGATAACTGGGAAAAGGAAGTTTCCAACGGATGTTTCTGAAAGTAACGAATACAACGAAAGTAAAACTAGAAACGAAATGGATAAGGAGTTTATAAGTTTTGTTGAAACAGAAGAAAATATGGAGTTTGTGCCTGCTAGACATATATTATCTTCTAGGTGGGCTAACGAGAACGATAATGAGGAAGAAAATCCAACTGTTAAAGAAGTCATgtccaaaaagaaaaaaactagCCCTTTGGGATCGAATTCCGAGAAGACTTTATCAAAAAGTTGTAGTTCTAGTAGTAGCGCGAGTTATAATACGGACAGTAGCGATGAAAATGGTATAACAACAAAAAATAACTCTGATTCAGAAAAAAATGCGAATAATATAACAGAATTGGATTCTGAAAGACGTATTAACATGCTTCAAGGATGCAGGAATGTTAATGAATTTGAAAGGTTGAATAGAATCGATGAAGGTACCTATGGCGTTGTGTTTAGAGCTAGAGATAAGAAGAGTGGGGAAATAGTGGCGTTAAAAAAAGTGAAATTGGAGAAAGAAAGAGAGGGTTTTCCCTTGACTGCGCTAAGGGAGATTAATATTTTACTATCCTTTAACCACCCTTCTATTGTGGATGTGAAGGAAGTTGTTATGGGTGATATGAACAGTGTGTTCATGGTTATGGAGTATATGGAGCATGATCTTAAAGGTTTGGTGGAGAGCATGAAGCATCCATTCAGTCAGTCTGAAGTTAAATGTTTGATGCAGCAGTTGTTATTGGGTGTTGGCTATCTTCATGACAACTGGGTACTACACAGGTAGTCTTTTTTTGTTGCTTTTGTGCTAGATATACTTAGTATATTTTATACCTCATCTTGTTTAAATCGATTAATTTCTTTTGATACTTAACCTGGTAGAGATTTGAAGACGTCAAATATTCTTATCAATAACTGCGGCGAACTAAAAATTTGTGACTTTGGCATGGCTCGTCAGTATGGGAGCCCATTAAAAGCTTATACTCAACTAGTGGTCACTTTGTGGTACAGGTAAAATTTTGGATATAATTATTCATAATATTTCCTTTGTTATGTCCTCGTTATCTTCTTCTTTTGCTTACTTCTACCCTACAATTTTAGGGCACCTGAACTTCTTCTAGGAGCTAAAAAATATTCAACTGCCATTGACATGTGGTCTTTAGGTTGTATTATGGCTGAACTCTTGACGAAGGAACCACTATTTCCAGGAAAATCTGAGATTGATCAGTTGAATAAGGTATgtgtgtatgtacgtatgtatatgtatgtgtgtgtgtgtgtgtgcatgtgtgtgtgtgtaatctgAGATTGATCGGTTAAGTATGCATATGACCATCATTTGTTAGCCTTTTCATTCGTTACTTTTGGCGAATTGTAATGTAGATCATCATCGTTGCTGCAGATTTTCAAAATTCTTGGTACCCCAAATAAGCGTATATGGCCAGGATTTGTTGATTTACCTGGAAGCAAAGCTAAATTTCTTGAGCAACCGTAAGTTTTCATTTCTTACCACTTTACAGTTTTAAACTAATCTTGATTCTTAATCAATGGTTTTAGCTGACATATTGTTTATATTACTACTAATTTTGTAAATTTGATGTTGCTTCTTCAGCTGTAACAAGCTTGGTGAAAAGTTTCGTCGGACGGCAGCATATACACCATTTACACCTACGGCAGTGACCACACGTCCAGTTCTTTCAGAATCTGGACTTGATCTGTTGAGCAGACTACTTACCTTCGATCCTGAAAAGGTACCATACTATCATATGAGTTTTGTTTTgaataactaaatatatttatatatgtatatgtatgtatacatatgcatgtatgtataaacATTAAGTGATGTCATGTTTACTTGCATTGTGCTTCCATTTCAGAGGATAACAGCACAAGAGGCTCTTCATCATGACTGGTTTAGGGAAGTTCCTCTGCCGAAACCAAAAGAGTTAATGCCGACATATCCTGCTCAACATGCACAAGATAGGTAACTTGTTATCTTAATCATAGCACTCATTTCCTCTTGTATTTTCTTTACATgtacttattatttatattatggtTTAGGCGTCTGAGAAGAGTTATTAAGAGCCCAGATCCTCTAGAAGAGTTACGAATCAAGGAATTGCAGTCTGGAGCTGGAACTGGTGGATTATTTGGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245512.1	9.3e-131	cyclin-dependent kinase G-2-like
Swissprot	A2XUW1.1	1.8e-99	Cyclin-dependent kinase G-2
trEMBL	A0A5P1E669	6.7e-131	cyclin-dependent kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G67580.1	51.94	2e-66	250		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G04180	AT1G67580.2	283	90	6	112	351	250	529	51.94	2e-66	250
Asa6G04180	AT1G67580.2	171	64	3	331	500	594	752	54.97	1e-47	187
Asa6G04180	AT1G67580.1	283	90	6	112	351	250	529	51.94	2e-66	250

Ortholog group

Species	Genes
Allium cepa	g258860.t1
Allium fistulosum	AfisC2G07019
Allium sativum	Asa6G04180.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	230	351	90.4	1.1e-25

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08818	CDC2L; cell division cycle 2-like	EC:2.7.11.22	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network