Detail information of Asa6G04370


Location
GeneChrStartEndStrand
Asa6G04370chr611737804441173780716+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247073.18.6e-27LOW QUALITY PROTEIN: auxin response factor 7-like
SwissprotQ6YVY0.13.1e-21Auxin response factor 7
trEMBLA0A5P1FKB58.4e-24Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G59750.160.715e-24 105ARF1auxin response factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag338627.t1
Allium fistulosumAfisC4G06200; AfisC6G02639
Allium sativumAsa0G01437.1; Asa0G04727.1; Asa6G04370.1; Asa6G04371.1; Asa6G04390.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily307129.65.3e-07

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.