Detail information of Asa6G04425


Location
GeneChrStartEndStrand
Asa6G04425chr611857711771185785786-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245231.14.1e-70uncharacterized protein LOC109823368
trEMBLA0A5P1E7112.9e-70HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G09710.131.524e-25 112Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag295470.t1; g444149.t1
Allium fistulosumAfisC3G05238; AfisC4G00053
Allium sativumAsa1G01185.1; Asa2G04349.1; Asa2G04358.1; Asa3G02166.1; Asa6G04425.1
Arabidopsis thalianaAT1G09710.1; AT1G09710.2; AT1G58220.1
Oryza sativaLOC_Os02g34630.1; LOC_Os02g34630.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13921.3Myb_DNA-bind_6Domain16121235.01.2e-08

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11110TERF1, TRF1; telomeric repeat-binding factor 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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