Detail information of Asa6G04539


Location
GeneChrStartEndStrand
Asa6G04539chr612263790561226385181-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020684327.16.9e-24protein NTM1-like 9
SwissprotB5X570.16.3e-22Protein NTM1-like 2
trEMBLA0A8J4R3422.1e-22NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G33060.143.904e-23 105ANAC014;NAC014NAC 014

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag441957.t1
Allium fistulosumAfisC5G05198
Allium sativumAsa6G04539.1; Asa6G04541.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily4214036.56e-09

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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