Detail information of Asa6G04569


Location
GeneChrStartEndStrand
Asa6G04569chr612336832671233684133+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrGFZ01439.14.2e-51homeodomain-like superfamily protein
SwissprotQ9LTH4.19.4e-48Protein PHYTOCLOCK 1-like
trEMBLA0A7J0FRU53.0e-51Homeodomain-like superfamily protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G46640.148.531e-55 213LUX;PCL1Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag355074.t1
Allium fistulosumAfisC1G07405; AfisC5G04313
Allium sativumAsa6G04569.1; Asa8G02516.1
Arabidopsis thalianaAT3G46640.1; AT3G46640.2; AT3G46640.3; AT5G59570.1
Oryza sativaLOC_Os01g74020.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain13218127.22.8e-06

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03921FAB2, SSI2, desA1; acyl-[acyl-carrier-protein] desaturaseEC:1.14.19.2 1.14.19.11 1.14.19.26 Fatty acid biosynthesisko00061
Biosynthesis of unsaturated fatty acidsko01040

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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