result

Gene information

Detail information of Asa6G04684

Location

Gene	Chr	Start	End	Strand
Asa6G04684	chr6	1263889016	1263891686	-

Sequences

CDS

Protein

Gene

>Asa6G04684.1
ATGGGAGCCCCATATGATAAGTATTTAGTTACCAAGATAAATTACAAGGATTCTACCATTCAGGTGGTTGATTCTGATTTAGCAAGCGGCCAATGCAACCTTCCTTTCCAAGCTCTAACCTTCAGGTCCTTTCCAAATGGTTATAGACTGCCGTCATTTAAGGATAATTTTGTTTACGATGAAGACGAAAGCTGGGTTTCTTTCCTGAATTGTTCAGAAAGCATTCGCTACTACAACAGCCAATATGAATTCCCATATGGACAATATGGACTCATTCCATGCCTCAGCCGTAATATGAGATTCATCTATATTCTTAATGGCTATAAAATGACGGATCTTCCCCGTTCTTGTAGTTATTTGGCTATGGTTCCTTCAGTTGCCGTAAGAGACGTGAATCTGTCCAATATTGGAGATGATGTTTTTAGAATTTTGAAGCGAGGATTCAGCATTTCATGGGGGGAACCTCCAAAATGGACCGTTATCTGCGACTGCCTTGTCACAGATTTATGGTAAGTGGTGTATGTCCTTCAAACTTAAAAATGACAAATGACACGACGACAATTCAAACACTATAGTATATATTGATGTTAGTACATAATCTTACTATTTGCTCCGCTGCAGGTTTCTCAAGCAGCGCGAAAATATAATATTTGGCTGGCATTCCTGGGATGGATTCCTGGAATCCATTCTATATCTAATTGTGTTTCCACAGGCGGCATTCCTGGTATGTATATACGTGCGTGGTGATGTTGCTCTATTCGGATGCTTACTCGCTTTCGTTGTGTTCCTCAACATCGTATCATTTTAtttaggtaattttttttttttttagcattaAGCACAACAACTAAATCAATGTCATGACTTTTGGATTACAAATCTCTTAAAACAAGAGTAGAAATGCCATTGAATTTTAGGTGTGGATGGCACGCATTGTAATTTTTCCTTTTCATGGTAACCATTAACCTACAAAAAAGTTTAGTTACTAACATAATAACCTTTTTGCAGTAATTATCACATTCGGAAGACTAATAATAGCACCACTATGCATACATGTCTTTCTCCTCTACGAACTATTAAAAAGGCTTAGTCCTATCGACTATATTGAAGCTTTTCTACGTAATCATCAACAAACAACACTAACACGGTACATGTACGTGGACATCGTCGCAATGACAAGCCATTTCAAAGATGTATTAGGACAAGGAGGATTTGGAACTGTTTACAAGGGGGAGCTACCTGGTGGTTATCTAGTCGCTGTCAAGTTGTTGGGTAAATCGAACGACAATGGTGAAGATTTTATCTGTGAGGTGTCCACTATTGGTAGTATTCATCATACAAATGTTGTTCGATTGATTGGGTTTTGCTCAGAAGGTTTACATAGAGCTCTTGTTTACGAGTACATGTACAATGGATCTCTGGACAAGTATATTTTTTCTTCTACCCGGCAATTCACCACAACGAAGCTGAATGAGATAGCTATTGGTGTGGCAAGGGGAATTGATTATTTACATCAAGGTTGTGATATGAGGATTCTTCATTTTGATATTAAGCCTCATAATATACTCCTGGATAGTAATTTCAACCCCAAAGTTTCTGATTTCGGACTTGCAAAACTCTATTCAAAAGAAACTAGCTTGGTTTCTACCTTTGCAGCAAGAGGTAAAAGTTAGAAAATTACTTGTTATCATAAAATCAATCCGCAATTTGAGAATGAATACTTGCTACAACCTCCGCTATGCATTATCTCTATgagtttttcctttcttttttccaaaAGATAATTATGCTACTGTTTGCATACTATATTTTTTTGTTGGTTCCTTCAAAATGTAGAGAACATTGACTATCCACACAGTTAAGTGTTAAATAAAGGTGAGTGAAGCATGATTCTTAGTACTCACTCCAATGAGTGCATCAAAAGATTTCTCAACGGAAATTAGTAATTTCCTATTATtaagttcttattttatttttattttttgtacatACTAATTATCACGTGGTGTAGCCTTGTAGGAATACTCTCAACAAGGTTAATTATACGCTGTCTCCTGTGTAAAACCCATACACAGAAGTTAATTATATGTTACCTCCTGTCTATAACCCATACATGGGAGTTAATCCAAATAACATACATAAAAATATGTTCctaaatttttgtatataaataaatctccatgccgatttatttaaaatgagttcACTCACAACAGGTACCATTGGATACATGGCACCGGAACTTATTTCAAGAAGTTTTGGACCGATATCTTACAAATCTGATGTGTATAGTTTTGGGATGTTGCTACTAGAAATGGCAGGCGGAAGAAGAAACTACGTCTCACGAGCAGAGAATTCTAGCGAAGCCTACTATCCCTCATGGATTTATGACCGACTGATTAAAACAACAAATTTAGAAGTGTTGAATCATAAGATCAAACCTGCAGATATTGAGATGAAATTGGGTAAAGTAGGATTATGGTGTATTCAAATGTCGCCATCTTCACGTCCCACCATGATTAGAGTTATAGAGATGTTGGAAGGTGATGTTGAAGACGTGGAAATGCCACCCAagcctttctttttttcttcttcggaCAGTACTGCAGAAGGACAAAATTTGTTTCACATGTCTTCCAGCGAAATATGGACAGTTTACGAAAGTGAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251698.1	5.0e-171	rust resistance kinase Lr10-like isoform X1
Swissprot	P93604.1	7.8e-97	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	A0A5P1FW25	5.7e-169	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66980.1	50.83	1e-84	310	GDPDL2;SNC4	suppressor of npr1-1 constitutive 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G04684	AT1G66980.1	301	142	3	278	572	792	1092	50.83	1e-84	310
Asa6G04684	AT1G66930.1	362	172	9	228	574	284	637	46.13	7e-84	308
Asa6G04684	AT5G38260.1	307	147	3	278	579	308	614	50.49	4e-83	305

Ortholog group

Species	Genes
Allium cepa	g136913.t1; g280171.t1; g52995.t1
Allium fistulosum	AfisC2G00223; AfisC2G00233; AfisC2G00249; AfisC2G00258; AfisC2G00286; AfisC2G00298
Allium sativum	Asa0G02049.1; Asa1G03947.1; Asa2G04946.1; Asa4G03239.1; Asa4G03241.1; Asa5G00172.1; Asa5G00217.1; Asa5G00610.1; Asa5G00663.1; Asa5G00666.1; Asa5G00704.1; Asa5G00708.1; Asa5G01144.1; Asa6G04684.1; Asa6G04685.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g02300.1; LOC_Os01g02320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	293	555	161.1	2.9e-47

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network