result

Gene information

Detail information of Asa6G04690

Location

Gene	Chr	Start	End	Strand
Asa6G04690	chr6	1265671300	1265673569	+

Sequences

CDS

Protein

Gene

>Asa6G04690.1
ATGGGGTTTCGATTCTTGAAGGAACGTGAAGGAGAGGAGGAGCGATTCGTGACGAAGGAGTTTTTTCCGATGGAGAAAGTTGTAGCCAACGATGAGGTTGCGGTGAAGGAGACGAGTTATGTTGATCTAACGGTGGATAACCAACCACGTCAGTCACCGACTGTGAAAAAGAGCAGGAGAGGGCCACGGTCTAAGAGTTCCCAGTATAGAGGGGTCACTTTTTACAGGAGAACTGGCAGATGGGAGTCTCATATTTGGTACTTAAAAAACAATCTCTTTTCCTTCAATATAATGTGCTCTTCGCAACATAGAAAAATTCTGGGGTACTTATGTGAATTTGTGTAATTATATACGAGCGTACATATTTCGGACAACTTAGAAAAATAATCCATGAGTTTGTAATTGGGAAAAATCAGATAAGGTTATGATGTTTTGGTATGAACTAATACAGATAAGAAAGGAAAACAATAGTTAGACTGTTGTATAGTTTGATAACTGTTACTACATTTAGTTGGAGTGGTTTCTTGGATCTGTTGCTGAATGAATATTTTGTGTCAATTTACTTAGGGATTGCGGTAAGCAGGTTTATTTGGGAGGGTTTGATACAGCTCATGCAGCTGCAAGGTTAGATTTCATGTTCAATATTTACGTTGTGGAGCATGAATTAGTGGTTTTCTGATTCGTttcttacttcttcttcttcaacttaattttttttttttaaaatttatttacaggGCTTACGATCGTGCTGCAATTAAATTTAGGGGAGTTGATGCTGACATTAACTTTACAATAAGCGACTACGATGAGGATCTGCAGCAGGTTTTTACTTTTACTGCATTCATTTTATATACTGTTAGAGTTTAATTTTGTTATAACAAATGAATGACCACTATAGTGTACAAATTTGTGGATTCGAATCACAACACTCAATCAATAGTGTCATATACAGTCTTTGTGTTACACGAATCTGCTGGATGTTAATTTTGTTGCTTTCTTAAGAAAAATGATTTCTTACTTCTTTTTTGGGATATCAGATGAGGGACTTATGCAAAGaggaatttgttcacatactcagAAGACAAAGTACTGGATTTTCAAGAGGAAGCTCAAAATACCGAGGAGTAACTCTTCATAAGTGTGGCCGATGGGAAGCACGCATGGGCCAATTTCTTGGCAAGAAGTAAGTTGCTAATACCTTAATTTTGTACTGTACTGggtgtgttttttttttctttttttttccccttttcttatttGATGAAATTGCCCAAAATGCATGAAATAAGTCATGTTTGTCAAGAGTGAGatataaaaaacaaatcttttagaCTCCGAACTTTTACCGACGTGAAGCTGATGCCTCAATGCAGGTACATTTACCTTGGGTTATTCGACAGCGAAATAGAAGCTGCAAGGTCCTATAAAAAATAATAAGATTTAAGTAGATTTTTCAATAGATAGTTCTTAGATTCAAATGCAAATCAATTGCTATAAATTAGTCATCCAATTTCTCATCAGGGCTTATGACAAAGCAGCTATCAAATTTAATGGAAAAGAAGCTGTCACTAATTTTGAGCCATGCTCATATGAAAGGGAGGGCACTGGTGAAGGTATTCAATTGTTAGTTTATATTTTTCACTGTATCGGTATATGGTATATGCGCATGTTagtaatttttatcaaatgttttgATAGCCATTGGCCATGAGCTTGATCTGAATTTGAGAATTTCACAACCAAATGTCAGTAGCCCAAAGAAGAACGATAATCAAAAGGGTCTTCAGTTCAATTTTGGCACCTTAGATGCTTTCGACTCCAGGAGATCTGGGGTAATAATTTATCCCTTCTGCATAACTGGCATGACTTATATTTTTACAGCGTTTATTATTTTTCTCCGAATAGCGATTCAATTTTTCGAATTGCTTGCACAAAATTCTACACTCGGAACCACAAAAGATGGGTTTTAATCTGATTGGAGTTTTATGTGGTAATCAAGGTTTTCAAAATGTGATTTAAACCACAAATcataaagttcaaactttaaaacgAAACGTGATTCAAATCATAAACTGTGGATTCAAAAGGTCCatattttaaagtttgtatatacattaacattgatttgatgtttgaacttattgggctattatttcatttttattttattttgaaaatattataactgGAATTATGAATCCAGAGAAATATATTAAATGTCTAAAAATATTAATTCGAGTTGAATGTTTTTGTAATTGCAGTTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK62414.1	1.3e-105	uncharacterized protein A4U43_C07F3620
Swissprot	Q2TQ34.1	2.2e-94	Protein TARGET OF EAT 1
trEMBL	A0A5P1E9B4	9.1e-106	APETALA2-like protein 2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G28550.3	69.05	8e-82	300	RAP2.7;TOE1	related to AP2.7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G04690	AT2G28550.3	252	61	2	17	251	85	336	69.05	8e-82	300
Asa6G04690	AT4G36920.2	218	55	1	55	269	118	335	73.39	1e-76	283
Asa6G04690	AT4G36920.1	218	55	1	55	269	118	335	73.39	1e-76	283

Ortholog group

Species	Genes
Allium cepa	g344686.t1
Allium fistulosum	AfisC5G04457
Allium sativum	Asa6G04690.1; Asa6G04691.1
Arabidopsis thaliana
Oryza sativa	LOC_Os07g13170.1; LOC_Os07g13170.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	67	116	37.2	2.4e-09
PF00847.17	AP2	Domain	159	209	37.0	2.7e-09

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09284	AP2; AP2-like factor, euAP2 lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network