result

Gene information

Detail information of Asa6G05114

Location

Gene	Chr	Start	End	Strand
Asa6G05114	chr6	1380409791	1380411838	-

Sequences

CDS

>Asa6G05114.1
ATGACCAATATCAATTTTTTGCTCATCTTCCTCATCATACCCACTTTCATCTCCTCTTCAAATTCAACCAACACCATCGACTTTTACGCCCTTCAATCTTTCAAATCAACATCCGACATTCATAACCATCTCTCCTCCTGGAACCCATCGACCAACCCATGCTCATCCTCATGGCTCGGAGTCACTTGTGAAGAAAACCATGTCACAAAACTCGTTCTTGAAGGTCTAAATCTCACTGGAACAATACAAGCTCTCACTCTTCTCACCAATCTTGATGTTCTCAGTCTCAAGAACAACTCTTTGTCGGATCCTATACACTTCTTGAACCTCCTCTTATGGCAGCGTCATCTTAAAATTTTGTACCTTTCCAACAATCAGTTTTCAGGGCCTTTTCCTGAAAACTTGGCCCTCCTTCATCATCTCCGACGCCTTGATCTTTCCAACAATCGCATATCTGGTCAAATACCTGCAGGTATAGGTTTTCTTTTGCCTCGTCTTAACACTCTTAGACTTGAAAAGAATTCCCTTACCGGCCAAATTCCTGCCTCCTTAGGACACATTTCAGGCCTGTATGATTTGAACTTGTCATATAACTCTCTTGTTGGCGAAATCCCTGAAAGTCTCTCATTGTTTCCGAATTCTTGTTTTATTGGAAATGTGGGATTATTATATGAAAATGGTAGCAAAAGTTGGGTGAAAAGATGGATGCTGATAGCGTTGCTGGTTTCATGTGTCCTGGTTTGTGTAGGAGGGTTTGTAGCTTTCGCCTACTGTATATACAAGAAAGGAGGTGAAAATAGAAATGGGAATGTGAAGAAATATGAGAAGATAATGTTCTTTGAAGGGTGTAGAGAGTTTGTAATGGAGGATTTGATGAGATCATCGGCGGAGATGTTAGGTAAAGGGATGGTGGGTTCAACATATCGGGTTGTGATGGATGGGCTAGGAGGAGAAGATGGTGTTGTGGTTAAAAGAGTGAAAAAAGACAGGTTGAAAAAGGTGAAGAAGGAATGGAATCAAGTTGATAGATGGATCAAGGAGATCGGCACTTGGAGAAATCCTAATGTTGTGAGTTTATTGGCTTATTATTCTTCAGATAAGGAGATATTGTTGGTGTATCAGTATGTTTCCAAGGGGAGTCTGCATAATCGGATTCATGAAAACCGAGGACCTGGAAGAACTCCTTTGAACTGGAAATCAAGGTATAAAATAGCTTTGTCTGCAGCAAAAGGTCTTACATTTCTGAGCGAGAAGTCAAAATTCAAACTCAGCCATTACCATCTTACCTCCTCAAACATTCTTATCGACCAAGATGACAATGCCTTAATTTCTGACTTTGCTCTCCATCAGCTTCTTGCTCCACAAGATATCTTAATAAGCAATGATTCCTCTACATGCCAAGTTCACAGTTTTGGGCTAGTCCTGTTAGAAATGCTAACAGGAAGACTGAAAGGAGAAAACGAGCTGGATTTAGTTAAATGGGTGCACATGGTCGTGGAAGAAGGATGGACAACTGAGGTTTTTGATTTTGAGTTGAAAAGGGGAAATGAATTTGAAAATGAGATGATTGCTCTACTGCAGATTGCACTGCATTGCTTGAACTGTGGAAGAAAGAGTAGGCCAAAAATTGCTGAGGTTCATAAGATGATAGCAGACATTACACCATCCTCATCTCCAAATCCGCAGTGA

Protein

Gene

>Asa6G05114.1
ATGACCAATATCAATTTTTTGCTCATCTTCCTCATCATACCCACTTTCATCTCCTCTTCAAATTCAACCAACACCATCGACTTTTACGCCCTTCAATCTTTCAAATCAACATCCGACATTCATAACCATCTCTCCTCCTGGAACCCATCGACCAACCCATGCTCATCCTCATGGCTCGGAGTCACTTGTGAAGAAAACCATGTCACAAAACTCGTTCTTGAAGGTCTAAATCTCACTGGAACAATACAAGCTCTCACTCTTCTCACCAATCTTGATGTTCTCAGTCTCAAGAACAACTCTTTGTCGGATCCTATACACTTCTTGAACCTCCTCTTATGGCAGCGTCATCTTAAAATTTTGTACCTTTCCAACAATCAGTTTTCAGGGCCTTTTCCTGAAAACTTGGCCCTCCTTCATCATCTCCGACGCCTTGATCTTTCCAACAATCGCATATCTGGTCAAATACCTGCAGGTATAGGTTTTCTTTTGCCTCGTCTTAACACTCTTAGACTTGAAAAGAATTCCCTTACCGGCCAAATTCCTGCCTCCTTAGGACACATTTCAGGCCTGTATGATTTGAACTTGTCATATAACTCTCTTGTTGGCGAAATCCCTGAAAGTCTCTCATTGTTTCCGAATTCTTGTTTTATTGGAAATGTGGGATTATTATATGAAAATGGTAGCAAAAGTTGGGTGAAAAGATGGATGCTGATAGCGTTGCTGGTTTCATGTGTCCTGGTTTGTGTAGGAGGGTTTGTAGCTTTCGCCTACTGTATATACAAGAAAGGAGgtgaaaatagaaatgggaatgTGAAGAAATATGAGAAGATAATGTTCTTTGAAGGGTGTAGAGAGTTTGTAATGGAGGATTTGATGAGATCATCGGCGGAGATGTTAGGTAAAGGGATGGTGGGTTCAACATATCGGGTTGTGATGGATGGGCTAGGAGGAGAAGATGGTGTTGTGGTTAAAAGAGTGAAAAAAGACAGGTTGAAAAAGGTGAAGAAGGAATGGAATCAAGTTGATAGATGGATCAAGGAGATCGGCACTTGGAGAAATCCTAATGTTGTGAGTTTATTGGCTTATTATTCTTCAGATAAGGAGATATTGTTGGTGTATCAGTATGTTTCCAAGGGGAGTCTGCATAATCGGATTCATGGTAACTGTTaatttttaatgctattatattttatttaattatttgaagaattattggtttctaatatgtatatgttattTCTCTATATCTGCTTATCTATGTTCTCTTGTATCTTTATTTTAGTTGGAAACAAAACCATAAATAAGCATTGTGCATGTACTATGTTCCGAGAGTTTAACCTTGTTTACAACCTACAATAATAATAAGTAATCcaacaaataaaagaaacaaatttatatAACACACTGTGCACCATTATCAATGCAAGTCTTAGAGAAAGCTATGACGAATATCATCTTATAAAAATGCATGATTCATGTTAAATAACTTCCcattaaattcatcattaattatttCAGAAAACCGAGGACCTGGAAGAACTCCTTTGAACTGGAAATCAAGGTATAAAATAGCTTTGTCTGCAGCAAAAGGTCTTACATTTCTGAGCGAGAAGTCAAAATTCAAACTCAGCCATTACCATCTTACCTCCTCAAACATTCTTATCGACCAAGATGACAATGCCTTAATTTCTGACTTTGCTCTCCATCAGCTTCTTGCTCCACAAGATATCTTAATAAGCAATGATTCCTCTACATGCCAAGTTCACAGTTTTGGGCTAGTCCTGTTAGAAATGCTAACAGGAAGACTGAAAGGAGAAAACGAGCTGGATTTAGTTAAATGGGTGCACATGGTCGTGGAAGAAGGATGGACAACTGAGGTTTTTGATTTTGAGTTGAAAAggggaaatgaatttgaaaatgagatgATTGCTCTACTGCAGATTGCACTGCATTGCTTGAACTGTGGAAGAAAGAGTAGGCCAAAAATTGCTGAGGTTCATAAGATGATAGCAGACATTACACCATCCTCATCTCCAAATCCGCAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242579.1	3.1e-114	probable leucine-rich repeat receptor-like protein kinase At1g68400
Swissprot	Q9M9C5.1	1.4e-55	Probable leucine-rich repeat receptor-like protein kinase At1g68400
trEMBL	A0A8K0I9R9	5.1e-95	Putative leucine-rich repeat receptor-like protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G68400.1	39.71	5e-93	338		leucine-rich repeat transmembrane protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05114	AT1G68400.1	622	264	15	27	553	31	636	39.71	5e-93	338
Asa6G05114	AT2G36570.1	648	307	15	19	559	21	651	33.49	2e-83	307
Asa6G05114	AT4G23740.1	620	319	21	16	562	18	620	34.03	2e-75	280

Ortholog group

Species	Genes
Allium cepa	g464413.t1
Allium fistulosum
Allium sativum	Asa0G00309.1; Asa6G05114.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g51400.1; LOC_Os02g16790.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	27	63	40.8	1.8e-10
PF00560.30	LRR_1	Repeat	140	161	12.0	0.22
PF07714.14	Pkinase_Tyr	Domain	297	463	66.6	1.9e-18

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network