Detail information of Asa6G05115


Location
GeneChrStartEndStrand
Asa6G05115chr613812169771381221332+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020675788.14.7e-32putative GATA transcription factor 22
SwissprotQ9SZI6.11.0e-20Protein GNC-LIKE
trEMBLA0A835VB251.6e-34GATA-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G26150.138.766e-25 110CGA1;GATA22;GNLcytokinin-responsive gata factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag374580.t1
Allium fistulosumAfisC5G05075
Allium sativumAsa5G02538.1; Asa6G05115.1; Asa6G05119.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain12716058.23.9e-16

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17894GATA2; GATA-binding protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.