Detail information of Asa6G05141


Location
GeneChrStartEndStrand
Asa6G05141chr613865720311386583427+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020098683.16.0e-174SWR1-complex protein 4
SwissprotQ8VZL6.13.3e-137SWR1-complex protein 4
trEMBLA0A8K0I9Z45.4e-177SWR1-complex protein 4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47210.160.402e-146 515myb-like transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag237523.t1
Allium fistulosumAfisC5G04033; AfisC5G04040; AfisC5G05097
Allium sativumAsa6G05141.1
Arabidopsis thalianaAT2G47210.1
Oryza sativaLOC_Os05g46330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16282.2SANT_DAMP1_likeDomain106180108.61.2e-31
PF05499.9DMAP1Family28937230.92e-07

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding
GO:0005634Cnucleus
GO:0006281PDNA repair
GO:0006338Pchromatin remodeling
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0035267CNuA4 histone acetyltransferase complex
GO:0043967Phistone H4 acetylation
GO:0043968Phistone H2A acetylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11324DMAP1, SWC4, EAF2; DNA methyltransferase 1-associated protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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