result

Gene information

Detail information of Asa6G05218

Location

Gene	Chr	Start	End	Strand
Asa6G05218	chr6	1405256743	1405259509	-

Sequences

CDS

>Asa6G05218.1
ATGACGGTCGAGAAAGAAAGCAAAGTTGAAGACGAAATCAATAGTTGTGTGTTAGTCGGAATTCAAATTGATGGAAATGGAAGAGATTTACTAAATTATTCTCTGAATAACGCAGTTGAAGAAGGAGATAGAGTTGTTGCTCTTTATATTTCGCGCAGTTCAGAGCTTGGGAAGAGTACTCAAGCCTCGATTAAAGCATTAAACAACTTTTTAGTAGAGTATGAAGAAGTCTGCAGGTTGAGAAAGGTAACTCTTACTGGTCGCGTTGCTCGAGGAGTTTCTATACGAAGAACAATAGTTAAAGAGGCACTACAATGTAATGCGAAAAAAGTTATTGTTGGAAGAACCAAAAATATTACTCTTGGAAGCTCTGCGTCGGTGGCCAGATATTGTTTAAAAAACTTACCTCTTTCGACTACTTTAATTGCCTTCCATGAGGGAGAAGTTTTTCTTCAGAGATTGTCCCAAAAGCCTTCTCAACAAGCCGAAACTCCAAAGCAGAATCTTCGTAGTATGCTGCATCCCAACATTGGCTTATCCACCGAAGACAACATAGAGAATGCAAATGAAAATGATAGGTGTCTTATTGTAGTAAGAAAACAACCTGAAATAAAACCTGGTTGGCCATTACTAAAGAAAGCAATAGCTGCAAACATGGAAACGGCAAAAGAAATCGAAGCTCGAAAAATGTCAGTGGTTCAGTGGGTCATGAATTTACCGGATCGTTCGTCGTTGTCTGTTAAATCACCCACTTCAGATTTAATTAACGAGTTGGAAATCATTCTCAGTAAAAATTCCTCCACTTGCAAATGGTTTCAGTATGAGGAGTTACAGCTTGCTACCAACTACTTTTCAAAAGATTATTTGATTGGAGAAGGTGGCAATAGTCGAGTTTACAAAGGATGTCTCGCGAATGGAGATAAAATTGCTGTCAAGCTATCAAAGTTATCGAATGAGACATCGAAAGATTTTCTTTTAGAAGCTGATATAATTACTAAATTGCAACATGAACGTATTGTTCCTTTGTTGGGAATTTGTGTTGAATGCAATACGTTTCTTTCGATTTATGGTTATTTCTCCAAAGGAAGTTTAGAAGAAAATCTACATGGTAAAAGAAATAAAGTCAAAACTCCATTAGCCTGGGAAAAAAGATTTAAAATAGCAGTTGGTGTAGCCGAAGCATTGAGTTATTTGCATACAGGTTCATCTGAATCAGTTGTGCACAGAGATGTTAAATCTTCAAATATCCTTCTTAATGACAAATTTGAACCACAGTTGTCTGATTTTGGACTGGCTGTATGGGCACCAAAGAATTCTTTGTCTGAGACTCAAAGTGAAATTGTAGGGACTTTTGGATATCTTGCGCCTGAATATTTCATGTATGGTAAAGTCAGCAGTAAGATCGACGTCTATGCATATGGTGTTGTTTTGCTTGAATTATTGACTGGTAGAAAACCAATTTCAGATGACAGTCCTAAAGGCCAAAAGAGCTTAGTTATGTGGGCCATACCAAGACTAGAAAGAGGAGATCTGAGTGATTGTTTGGATCCAAATATTAATGGGGTTTTCGAAGAGAAGAAAGTAAGAAGAATGATAAAGGTATCATCTTTGTGCATTACACGTACGACGCGACTTAGAACGCAAATGAGTCAGGTACTCAGCCTTTTAAAAGGGGAAGAGGAGGAGGTGGTTCGGACATGGCTAAACTCAAAATCAATCATGGAATGCCAAGATGAAGAAGCATATCCTAGCTTGAGCATCGGGTCACATTTGGGACTAGCATTGCTTGATGTTGAAGAAGACGATGCTTCTGAAATTAGCTTCGAACAAAACCAGCTGAACTCTTTAGATGATTACCTGATAGAGAGATGGAGCAGATCTTCAAGTTTTGATTAG

Protein

Gene

>Asa6G05218.1
ATGACGGTCGAGAAAGAAAGCAAAGTTGAAGACGAAATCAATAGTTGTGTGTTAGTCGGAATTCAAATTGATGGAAATGGAAGAGATTTACTAAATTATTCTCTGAATAACGCAGTTGAAGAAGGAGATAGAGTTGTTGCTCTTTATATTTCGCGCAGTTCAGGTAATTTAACCTCcccaaaaaattacatttttttaaaactataatcATGATCATTTTTTGATTTCTTATTGCTGAATTCACTTAGAGCTTGGGAAGAGTACTCAAGCCTCGATTAAAGCATTAAACAACTTTTTAGTAGAGTATGAAGAAGTCTGCAGGTTGAGAAAGGTTAGCACTTGTTTACCTTTTTTCCCCTTTCTCAAAATCGCACAATTTGTAGTTTGATCTCTATGATTTTAATGGAGTTCAGGTAACTCTTACTGGTCGCGTTGCTCGAGGAGTTTCTATACGAAGAACAATAGTTAAAGAGGCACTACAATGTAATGCGAAAAAAGTTATTGTTGGAAGAACCAAAAATATTACTCTtgggtaattaatttatttaccttcTTAATGCTTATTTTATCAAAGAACAATCAGAAAATATCCCAGTGCTTTAGTTACATTGATATCCTTTCAGAAGCTCTGCGTCGGTGGCCAGATATTGTTTAAAAAACTTACCTCTTTCGACTACTTTAATTGCCTTCCATGAGGGAGAAGTTTTTCTTCAGAGATTGTCCCAAAAGCCTTCTCAACAAGGTCTGTTCTTGCATTCTTATTATGATTCttattatttatctttttgtttgAACCTGTAAAACTGAAATTCCTCGTACTTTTGATATCTTACTTCTGAATTTGACTATTACATATGAATTCAAAATCTTTTACTGATATTGCcaagaaatatgtttttaattaatttttgatttttgcaAAATAGCCGAAACTCCAAAGCAGAATCTTCGTAGTATGCTGCATCCCAACATTGGCTTATCCACCGAAGACAACATagagaatgcaaatgaaaatgataGGTGTCTTATTGTAGTAAGAAAACAACCTGAAATAAAACCTGGTTGGCCATTACTAAAGAAAGCAATAGCTGCAAACATGGAAACGGCAAAAGAAATCGAAGCTCGAAAAATGTCAGTGGTTCAGTGGGTCATGAATTTACCGGATCGTTCGTCGTTGTCTGTTAAATCACCCACTTCAGATTTAATTAACGAGTTGGAAATCATTCTCAGTAAAAATTCCTCCACTTGCAAATGGTTTCAGTATGAGGAGTTACAGCTTGCTACCAACTACTTTTCAAAAGGTCTTTTTCTACAAATTTCGATTTTGGCAtgttttttaaaacctttttttgttGTTATAATAGTTTCTGTGATATTTTGAACAGATTATTTGATTGGAGAAGGTGGCAATAGTCGAGTTTACAAAGGATGTCTCGCGAATGGAGATAAAATTGCTGTCAAGCTATCAAAGTTATCGAATGAGACATCGAAAGATTTTCTTTTAGAAGCTGATATAATTACTAAATTGCAACATGAACGTATTGTTCCTTTGTTGGGAATTTGTGTTGAATGCAATACGTTTCTTTCGATTTATGGTTATTTCTCCAAAGGAAGTTTAGAAGAAAATCTACATGGTAAAAgttcaaaatattgtttttttaaatCATCAGAAATACCTGAAATTTTCAaggctaatttttatttttatttttttattggaaAAATTACAGGAAATAAAGTCAAAACTCCATTAGCCTGGGAAAAAAGATTTAAAATAGCAGTTGGTGTAGCCGAAGCATTGAGTTATTTGCATACAGGTTCATCTGAATCAGTTGTGCACAGAGATGTTAAATCTTCAAATATCCTTCTTAATGACAAATTTGAACCACAGGTAAAGTTACATTCTAATCAATTACCAGTTTGTTTTTCCAAATTACCTCATACATATTAAACGAGGAATTTTGCATGTGTGTAGTTGTCTGATTTTGGACTGGCTGTATGGGCACCAAAGAATTCTTTGTCTGAGACTCAAAGTGAAATTGTAGGGACTTTTGGGTATGTCATTTTGTTGATTTTATCATTATATTAACATGCATTTGGCCTGCTATCTAATTgacaatatatttttaactttttgatAGATATCTTGCGCCTGAATATTTCATGTATGGTAAAGTCAGCAGTAAGATCGACGTCTATGCATATGGTGTTGTTTTGCTTGAATTATTGACTGGTAGAAAACCAATTTCAGATGACAGTCCTAAAGGCCAAAAGAGCTTAGTTATGTGGGTAAGATATATCTTTCAATGCTAATTATACTTCTTGATATTGTAAGTCTGAATAGCGTTAATTTTGTGCATGTTGTTAATGTCAGGCCATACCAAGACTAGAAAGAGGAGATCTGAGTGATTGTTTGGATCCAAATATTAATGGGGTTTTCGAAGAGAAGAAAGTAAGAAGAATGATAAAGGTATCATCTTTGTGCATTACACGTACGACGCGACTTAGAACGCAAATGAGTCAGGTACTCAGCCTTTTaaaaggggaagaggaggaggtggtTCGGACATGGCTAAACTCAAAATCAATCATGGAATGCCAAGATGAAGAAGCATATCCTAGCTTGAGCATCGGGTCACATTTGGGACTAGCATTGCTTGATGTTGAAGAAGACGATGCTTCTGAAATTAGCTTCGAACAAAACCAGCTGAACTCTTTAGATGATTACCTGATAGAGAGATGGAGCAGATCTTCAAGTTTTGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020262919.1	2.3e-235	receptor-like cytosolic serine/threonine-protein kinase RBK1
Swissprot	Q5XF57.1	2.7e-63	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	A0A5P1F5C3	8.0e-214	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G63940.1	38.33	7e-123	438		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05218	AT5G63940.1	694	343	14	14	631	19	703	38.33	7e-123	438
Asa6G05218	AT2G16750.1	614	305	13	17	603	14	591	40.07	8e-120	427
Asa6G05218	AT1G77280.1	473	198	9	196	631	331	794	48.41	9e-115	411

Ortholog group

Species	Genes
Allium cepa	g333040.t1
Allium fistulosum	AfisC5G05163
Allium sativum	Asa4G04995.1; Asa5G02247.1; Asa6G03179.1; Asa6G05218.1; Asa7G00717.1; Asa7G07608.1; Asa8G02074.1
Arabidopsis thaliana	AT2G16750.1; AT4G35030.1; AT4G35030.2; AT4G35030.3
Oryza sativa	LOC_Os03g13820.1; LOC_Os03g13820.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	286	506	141.2	3.3e-41

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0006950	P	response to stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network