result

Gene information

Detail information of Asa6G05465

Location

Gene	Chr	Start	End	Strand
Asa6G05465	chr6	1486102576	1486105007	+

Sequences

CDS

>Asa6G05465.1
ATGAAACTGCTACTCTACGCAATTCTCCTCCTCCTCCCCCCAATCTCATCAATCCCTAACCCAATCTGCCCTTCCTCATGTGGGCCAATCCAGATCCGCTACCCGTTTGGCCTAACCGCCAACTGCTCCCTCCCCGGCTTCCAACTCCACTGCCAAAGCCAAACCCCCTTCCTCTCATCCCTTAGAATCCTCAACATATCCAACGGCCAAATCCTCGTCGACTCCACTCCGTACATAGCCTCTGACTGCAAATCCGGGTCGCGCAACCTCTCCCACATATCCGTACCCGATAACTCCCCTTTCCTCATCTCCTCCTCCAACCGCTTCGTGGCCGTCGGATGCGACACTGTCGCCATCGTCAACGACCAAACCGGCCACTCTACAGGGGGGTGCGTCTCCCTCTGCAATGAAAAGTCCGGGTTCTGCCAAGCATCCATTCCCAAAGGCAGAAAGTACTTGACTCTAGGCGTAGGAAACATGTATGGGTACAGGAACGTTTCGGGTTCGGGCCTCAACTGTAGTTACGGGTTCCTGGTCCATGAGGGATGGAATGTCAAAAAGGATGCGAGAATAGCAATGAGTTTGGACTGGGAGATCGAAGAAAATGGAGATAAATGTTCAAAATGCGGTGAGAATTCCTACTGCGAAGAGAGCCGTACTGGCTATCTCTGTTATTGTATGGGCGGATTCTCGGGAAATCCTTATGTTAATGGTTCTGATGCCTGTAGAGATGTTGATGAATGCCTGAATCCTGAAACCAACCCTTGTGTTCCCGAAGCCAAATGCTACAACCGGGTTCCGGGCTTCAAATGTAAATGCCCGTTTGGTAGTTCTGGTGATGGAACTGCTGTTGGATCCGGGTGTAAAAAGATTTTCCGTATCATTGAAACCGTTGTAGGTGTTCTTAGCATCAGTGCGGTGACACTAGCAGTCACCCTGTGGTTCTTCCTTGCCTACAAACGCCGTGCACTGATAAACAAAAAGTCGGAACACTTTCGAAAAAATGGAGGCCTGATACTGAAGCAAAAGGGCCAAGAGCACGCGATAATCTTCTCATCCGACGACTTAAAACTGGCCACAAATGGTTATAGCCCGAGCCAGATCCTGGGAACCGGAGCCTATGGCACAGTCTACAAAGCCCACCTCCAAGACGGGACTACAGCGGCGATAAAGAAGTCCAAAATAATAGACCAGACCCAAATCGACCTCTTCATAAACGAACTGATAATCCTGTCCCAAATCCAGCACCCGAACATAGTCCGGCTCCTGGGCTGCTGTCTGGAGACAGAGGTCCCAATGCTGGTCTACGAGTACGTCCCCAACGGCACGCTGTATGAGCACATCCATGGCAAAAACACCAAAATGTCATGGAAAACAAGGATGAGGATAGCGATTGAGACGGCAGAGGCTCTATCTTACCTGCACTCGCTGAGGATTTTCCACAGGGACGTGAAATCGACGAACATACTTCTGGACGAGAACATGAAGGCGAAGGTTTCGGATTTTGGAATATCGAGGGTGGTGCAGATGGGGCAGACGGAGGTGGTAACGTTGGTGCAGGGGACGTTCGGGTATTTGGACCCGGAGTACATGCAGACGAGCCAGTTGACGAGCAAGAGCGATGTGTACAGCTATGGGGTGGTGCTGGTGGAGCTGTTGACGGGGCAGAAGCCACTGAGAGGGGAAAGGATGGGTGAAGATAGCAACCTTGCGATGTACTTCCTGTCGTCGATGAAGAGCAGGGAGGTGGAGGAGTTTGTGGAGGAGGAGGTGGTGAAGGGAGGGAGGAAGGAGGAGATAGCGGGCGTGATGGAGCTGGCGAGGAAGTGCTTGCTTTTGAGAGGGGAGAAGAGGCCCAGTATGGAAGAGGTTGCTAGGGAGCTTTTGCTTGTTTCTGGAGTTGAAAGAGACGACGATGATGGCGTGGGGTCGTGGTTGAATGCTCAGCCTAGTTTCCCCCCTAATTTGGAGGTTAACATTGATTTGGCTCGGTAA

Protein

Gene

>Asa6G05465.1
atgaaactGCTACTCTACgcaattctcctcctcctccccccaaTCTCATCAATCCCTAACCCAATCTGCCCTTCCTCATGTGGGCCAATCCAGATCCGCTACCCGTTTGGCCTAACCGCCAACTGCTCCCTCCCCGGCTTCCAACTCCACTGCCAAAGCCAAACCCCCTTCCTCTCATCCCTTAGAATCCTCAACATATCCAACGGCCAAATCCTCGTCGACTCCACTCCGTACATAGCCTCTGACTGCAAATCCGGGTCGCGCAACCTCTCCCACATATCCGTACCCGATAACTCCCCTTTCCTCATCTCCTCCTCCAACCGCTTCGTGGCCGTCGGATGCGACACTGTCGCCATCGTCAACGACCAAACCGGCCACTCTACAGGGGGGTGCGTCTCCCTCTGCAATGAAAAGTCCGGGTTCTGCCAAGCATCCATTCCCAAAGGCAGAAAGTACTTGACTCTAGGCGTAGGAAACATGTATGGGTACAGGAACGTTTCGGGTTCGGGCCTCAACTGTAGTTACGGGTTCCTGGTCCATGAGGGATGGAATGTCAAAAAGGATGCGAGAATAGCAATGAGTTTGGACTGGGAGATCGAAGAAAATGGAGATAAATGTTCAAAATGCGGTGAGAATTCCTACTGCGAAGAGAGCCGTACTGGCTATCTCTGTTATTGTATGGGCGGATTCTCGGGAAATCCTTATGTTAATGGTTCTGATGCCTGTAGAGATGTTGATGAATGCCTGAATCCTGAAACCAACCCTTGTGTTCCCGAAGCCAAATGCTACAACCGGGTTCCGGGCTTCAAATGTAAATGCCCGTTTGGTAGTTCTGGTGATGGAACTGCTGTTGGATCCGGGTGTAAAAAGATTTTCCGTATCATTGAAACCGTTGTAGGTACATTCATAATTCTTCTGATGCTATTTTAAGTGTGTGTACGCAAATTGAAATTAGTGCTTATCGATCCAGTTGTTTTTGTAAAGTAATAAGAATTAAGCACAGCTCAACTGTTTGATGCATAATGGCTATGATCAGTCACGAAACGCTTGCTTCAGCAAGTGTTGGTTTAGGCAATCAAAACAAATAAGTCAATGTTTTTTCGTAGTATGTGTTTATGGTTCTTAATTTGATTACAAGTATCTTGTATTAAAAATCTTTGTGCTGCTTATTGAAGTTTTGGATGTTGTTTTATTACGTTATAAAAAACATAATAATGAAGTTCTAACTGCATGTTTAGGACAATGTCATAAAAACTTATATCTTTATTAGTTGCGGAAActcttattataaaaaaaaaaaaactgaaatatatgTTGTTTAACAATTTTTGTCAGGTGTTCTTAGCATCAGTGCGGTGACACTAGCAGTCACCCTGTGGTTCTTCCTTGCCTACAAACGCCGTGCACTGATAAACAAAAAGTCGGAACACTTTCGAAAAAATGGAGGCCTGATACTGAAGCAAAAGGGCCAAGAGCACGCGATAATCTTCTCATCCGACGACTTAAAACTGGCCACAAATGGTTATAGCCCGAGCCAGATCCTGGGAACCGGAGCCTATGGCACAGTCTACAAAGCCCACCTCCAAGACGGGACTACAGCGGCGATAAAGAAGTCCAAAataatagaccagacccaaatcgACCTCTTCATAAACGAACTGATAATCCTGTCCCAAATCCAGCACCCGAACATAGTCCGGCTCCTGGGCTGCTGTCTGGAGACAGAGGTCCCAATGCTGGTCTACGAGTACGTCCCCAACGGCACGCTGTATGAGCACATCCATGGCAAAAACACCAAAATGTCATGGAAAACAAGGATGAGGATAGCGATTGAGACGGCAGAGGCTCTATCTTACCTGCACTCGCTGAGGATTTTCCACAGGGACGTGAAATCGACGAACATACTTCTGGACGAGAACATGAAGGCGAAGGTTTCGGATTTTGGAATATCGAGGGTGGTGCAGATGGGGCAGACGGAGGTGGTAACGTTGGTGCAGGGGACGTTCGGGTATTTGGACCCGGAGTACATGCAGACGAGCCAGTTGACGAGCAAGAGCGATGTGTACAGCTATGGGGTGGTGCTGGTGGAGCTGTTGACGGGGCAGAAGCCACTGAGAGGGGAAAGGATGGGTGAAGATAGCAACCTTGCGATGTACTTCCTGTCGTCGATGAAGAGCAGGGAGGTGGAGGAGTTTGTGGAGGAGGAGGTGGTGAAGGGAGGGAGGAAGGAGGAGATAGCGGGCGTGATGGAGCTGGCGAGGAAGTGCTTGCTTTTGAGAGGGGAGAAGAGGCCCAGTATGGAAGAGGTTGCTAGGGAGCTTTTGCTTGTTTCTGGAGTTGAAAGAGACGACGATGATGGCGTGGGGTCGTGGTTGAATGCTCAGCCTAGTTTCCCCCCTAATTTGGAGGTTAACATTGATTTGGCTCGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010928975.1	1.1e-198	wall-associated receptor kinase 2-like
Swissprot	Q9LMN8.2	1.5e-109	Wall-associated receptor kinase 3
trEMBL	A0A6I9RLR7	7.6e-199	wall-associated receptor kinase 2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	39.16	3e-120	429	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05465	AT1G21240.1	669	338	20	19	628	27	685	39.16	3e-120	429
Asa6G05465	AT1G21230.1	686	356	20	3	628	6	678	37.46	6e-114	408
Asa6G05465	AT1G21270.1	674	335	22	19	628	25	674	37.24	2e-113	406

Ortholog group

Species	Genes
Allium cepa	g229892.t1
Allium fistulosum	AfisC2G00739; AfisC5G02240; AfisC5G05563; AfisC8G01612
Allium sativum	Asa6G05465.1; Asa7G02779.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	22	116	68.4	7.2e-19
PF00069.22	Pkinase	Domain	364	626	183.3	5e-54

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005509	F	calcium ion binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0030247	F	polysaccharide binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network