result

Gene information

Detail information of Asa6G05545

Location

Gene	Chr	Start	End	Strand
Asa6G05545	chr6	1507845903	1507848202	+

Sequences

CDS

>Asa6G05545.1
ATGGGTAACTGTGTGCAGAGGAGGCCGTCCCAAACATCCCCACACCTCCATCAACATCAGTATGGAGTAGGAATTGAGAAGATGAAGGTGGACCGTGGGTACTACACCAGTGGAGGATCAAACGGACATGAAAAGGAGAGATTAATGAAGGAGGAGGAGGAGGTGATGGCAATGGAGGAGGGTAGGAGGAAGATGGAGGAGGAGTTGGTGGATGGGTGGCCGAGGTGGTTGGTTAACAATGTACCCAGAGGTGTCCTTGTCGGCTTGGTTCCTAAAAGCGCAGAATCTTACTCCATGATCGGCAAGGTAGGTTCAGGCACATACAGCAACGTGTACAAAGCAAGGGACAAAGACACAGGAAAACTAGTAGCTCTAAAGAAGGTCAGGTTCGACACATCAGAGTCTGAAAGCATCCGATTCATGGCACGAGAAATCTCCGTCCTCCAAAAACTCGACCACCCAAACGTTCTGAAACTCGAAGGCCTTGCGACTTCGCGCATGCAGTACAGTCTCTACTTGGTGTTCGAGTTCATGCAAACTGACCTAGCCAGAATCATATCGAGGCCCAACACGACTCTTAACGAATCTCAGGTCAAGTTGTACATGCATCAGCTGCTTTCCGGGCTGCAGCACTGCCACGAACGAGGGATCCTGCACCGGGATATAAAGGGATCAAATTTGCTGATCGATAGGAACGGAATGCTCAAGATCGGAGATTTCGGACTGGCCAATGAGTTTGATCCGGAGAAGAAAAAACCCCTCACCAGTAGGGTTGTTACCCTGTGGTATAGGGCTCCCGAGCTGTTGCTAGGGTCTACGGATTACGGGGTCGGGATTGATTTGTGGAGCGCGGGTTGTTTGTTGGCTGAAATGTTCACCGGACGCCCTATTATGCCTGGTAGAACCGAGGTGGAACAACTACATAGGATATTTAAACTATGTGGATCTCCATCAGAAGACTATTGGAGAAAATTAGGGCTTTCCACCAATTTTAGGCTTCCGACGCCATATAAACCAAGCATTTATGAGACTTTTAGAGATTTCCCTGCTTCCTCTTTGGGTCTACTAATCACACTTCTTCAACTCTACCCTTATAATCGTGGCACTGCAGCTTCTGCTTTGCAAAATTCGTTCTTCAGTACACTACCACTGGCTTGTGGTATTTCAGAACTTCCAGTACCAGCAGTTCAACAGGAGGAGGAGGAAGATCCAGTTCAACAACGTAGAAAGCGCAGAAGCTCGAAAGCAAAGCAGCGTTCCAAATCCCAAAAAGAGACCACAGTAAAGTTTGATAATGACATGAATAAACCAGAACCAAATCACACAAAAGAGGAATCGAAACAAACAAAGTACAACCAAGAATCAGCAAGCAGCAGCACTGGAAGCACAAACCAGGAGATATATCCTGAAAACTCACCCCCATTGATAAATTCCACGCTTGCATCTAAACCTACACCAAGAACACAGTACCATCCCGCTTCTTCTAGAAACATCATGAACCCGCATTTGCCACCTCGCCCTTCTTCTAGAGTTTCGTACGCTGATATTAATGTGGAACAAGATATTAATTTGTTGAATTTGAGAGGTTTGGAGAAGAGGTCTGCTTCAATGTCCGATGCCAATAGAGTTGCACGGGAGCAGCTGCCTAAGCATTACGGGGTTGGCTGA

Protein

Gene

>Asa6G05545.1
atgggtaacTGTGTGCAGAGGAGGCCGTCCCAAACATCCCCACACCTCCATCAACATCAGTATGGAGTAGGAATTGAGAAGATGAAGGTGGACCGTGGGTACTACACCAGTGGAGGATCAAACGGACATGAAAAGGAGAGATTaatgaaggaggaggaggaggtgatgGCAATGGAGGAGGGTAGGAGGAAGATGGAGGAGGAGTTGGTGGATGGGTGGCCGAGGTGGTTGGTTAACAATGTACCCAGAGGTGTCCTTGTCGGCTTGGTTCCTAAAAGCGCAGAATCTTACTCCATGATCGGCAAGGTTTGTCCGTTTATCTATATGATACACATAATTCATTTGATATACACTTCaaataaacacacacaaaaaatGCAGGTAGGTTCAGGCACATACAGCAACGTGTACAAAGCAAGGGACAAAGACACAGGAAAACTAGTAGCTCTAAAGAAGGTCAGGTTCGACACATCAGAGTCTGAAAGCATCCGATTCATGGCACGAGAAATCTCCGTCCTCCAAAAACTCGACCACCCAAACGTTCTGAAACTCGAAGGCCTTGCGACTTCGCGCATGCAGTACAGTCTCTACTTGGTGTTCGAGTTCATGCAAACTGACCTAGCCAGAATCATATCGAGGCCCAACACGACTCTTAACGAATCTCAGGTCAAGTTGTACATGCATCAGCTGCTTTCCGGGCTGCAGCACTGCCACGAACGAGGGATCCTGCACCGGGATATAAAGGGATCAAATTTGCTGATCGATAGGAACGGAATGCTCAAGATCGGAGATTTCGGACTGGCCAATGAGTTTGATCCGGAGAAGAAAAAACCCCTCACCAGTAGGGTTGTTACCCTGTGGTATAGGGCTCCCGAGCTGTTGCTAGGGTCTACGGATTACGGGGTCGGGATTGATTTGTGGAGCGCGGGTTGTTTGTTGGCTGAAATGTTCACCGGACGCCCTATTATGCCTGGTAGAACCGAGGTACGTTCATTCTTATGTGGCATTCAAATAAATTCACTAAGTGTCCAATATGACAAAGGAATAATTTAGTTTTTGCGTGTAGGTGGAACAACTACATAGGATATTTAAACTATGTGGATCTCCATCAGAAGACTATTGGAGAAAATTAGGGCTTTCCACCAATTTTAGGCTTCCGACGccatataaaccaagcatttatgaGACTTTTAGAGATTTCCCTGCTTCCTCTTTGGGTCTACTAATCACACTTCTTCAACTCTACCCTTATAATCGTGGCACTGCAGCTTCTGCTTTGCAAAATTCGGTAACTTTTTTATTCTGATGAGCTAAGAAATTAACTTTATgcttttaattgaataaaaaaaacttCTGTTACGTCTATATAATCTCAGTATCATCAGTTAAGGTTAAGTATAACCATGAAAACATCTAAGTCTAACTAATGACAAGTGATCCTGCTTTAAGCGGAATGGTAAAAAAACTTTCAATGCAAGGATAGATACAGAGTGAAAAAGTACACTGTTCAAGGTAAAGTTTGAACTTCAAAGTTTTTATACATGTTAAGACAGTAGTATAATAGCTGAAACTGATTGCTAAGCGTAATGAAATgactgtaaaccaaaactctgaacGCAGTTCTTCAGTACACTACCACTGGCTTGTGGTATTTCAGAACTTCCAGTACCAGCAGttcaacaggaggaggaggaagatccaGTTCAACAACGTAGAAAGTAAAAGCTCATAATTTTCCAATCTAACTGTTTGTTTACTATCATTTGCATTGACTAACATCTGCAAGCACAGGCGCAGAAGCTCGAAAGCAAAGCAGCGTTCCAAATCCCAAAAAGAGACCACAGTAAAGTTTgataatgacatgaataaaccagAACCAAATCACACAAAAGAGGTAAGCTCGACagtattctaatattcaaataataCCGAATACTGTTTGTAACCTGATGTTCTGTTCATAGGAATCGAAACAAACAAAGTACAACCAAGAATCAGCAAGCAGCAGCACTGGAAGCACAAACCAGGAGATATATCCTGAAAACTCACCCCCATTGATAAATTCCACGCTTGCATCTAAACCTACACCAAGAACACAGTACCATCCCGCTTCTTCTAGAAACATCATGAACCCGCATTTGCCACCTCGCCCTTCTTCTAGAGTTTCGTACGCTGATATTAATGTGGAACaagatattaatttgttgaatttgaGAGGTTTGGAGAAGAGGTCTGCTTCAATGTCCGATGCCAATAGAGTTGCACGGGAGCAGCTGCCTAAGCATTACGGGGTTGGCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265589.1	8.1e-160	probable serine/threonine-protein kinase At1g54610
Swissprot	Q9ZVM9.1	9.7e-118	Probable serine/threonine-protein kinase At1g54610
trEMBL	A0A5P1EWP8	5.8e-160	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G54610.1	57.67	1e-125	447		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05545	AT1G54610.2	378	155	3	67	440	89	465	57.67	1e-125	447
Asa6G05545	AT1G54610.3	378	155	3	67	440	89	465	57.67	1e-125	447
Asa6G05545	AT1G54610.1	378	155	3	67	440	89	465	57.67	1e-125	447

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC5G05647
Allium sativum	Asa6G05545.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	97	379	231.0	1.4e-68

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08819	CDK12_13; cyclin-dependent kinase 12/13	EC:2.7.11.22 2.7.11.23	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network