Detail information of Asa6G05790


Location
GeneChrStartEndStrand
Asa6G05790chr615880615651588061771-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRRT54713.12.5e-18hypothetical protein B296_00024161
SwissprotQ39117.11.1e-15Trihelix DNA-binding protein GT-2
trEMBLA0A8J5HJ814.7e-19Myb-like domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G76890.276.478e-1885.1AT-GT2;GT2Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag415780.t1
Allium fistulosumAfisC2G01009
Allium sativumAsa3G01037.1; Asa5G00377.1; Asa6G04766.1; Asa6G05790.1; Asa7G03385.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g01380.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain35046.82.7e-12

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.