Detail information of Asa6G05897


Location
GeneChrStartEndStrand
Asa6G05897chr616250482161625054952+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008807276.10.0e+00probable ATP-dependent DNA helicase CHR12 isoform X2
SwissprotF4J9M5.18.9e-311Protein MINUSCULE 1
trEMBLA0A8K0NAW90.0e+00ATP-dependent DNA helicase CHR12-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G06010.174.310.01118ATCHR12;CHR12Homeotic gene regulator

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag505965.t1; g505967.t1
Allium fistulosumAfisC5G02102
Allium sativumAsa6G05897.1
Arabidopsis thalianaAT3G06010.1; AT5G19310.1
Oryza sativaLOC_Os05g05230.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily124398235.18.5e-70
PF00271.28Helicase_CFamily41853169.52.6e-19
PF14619.3SnACDomain61169042.85.6e-11

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11647SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4EC:3.6.4.- Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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