result

Gene information

Detail information of Asa6G05903

Location

Gene	Chr	Start	End	Strand
Asa6G05903	chr6	1626088452	1626089942	-

Sequences

CDS

>Asa6G05903.1
ATGGCTTTTCAATACCTAATACTACTTATTTCTTTATTGCTACTACCTATTTATATCCTAATAAAAAACAACAGGCCTCGCGATGACAATAGACCTTACCCAGTGCTTGGCCACCTCCCTCAGTTCCTTAAAAACCGGCACAGATCATTCGACTGGTTCACTGAACTCTTAAGTTCGTCTGACACAAACACCATCTTATTTTACCGCATGGGCAATACTCGATCTGTCATTACGGCAAACCCAGAAAATGTGGAACATGTGCTTAAATCTGATTTTGAGAATTTCCCGAAAGGTCCTAAAGTCCGCTTCACGCTTCATGATTTTCTTAGCAACGGCATCTTCAACTCTGATGGTGATCAATGGAAGACTCAAAGAAAAAATGCAAGCTATGAATTCAGTACAAAATCCCTGCGTAACTTTGTAGTTGAGACTGTGCAGAAAGAGACTTCAACCAGGCTTATTCCTCTCCTGGAGAAATATGCAAAGAATGAGCAGGCATTCGACATACAAAATGTGCTTGAAAGATACTCATTCGACACTATTTGTAAAGTTGCATTTGATGTAGACCCAGCTTGTTTAGTAGATGATGCCGTGAAATCTGATTTCGCCGATGCTTTTGGAGACGCTTCCAGTTACAGTGCTGGAAGGTTCAGGTATGCTATACCTGGATTATGGAGAATCAAGAAGTTACTGAACATCGGTTCAGAACGAAGACTGAAAGAATCCATTTCTACAGTGCACGATTTCGCAACAAGTATTATTCGTGAGCGGATGAAAGATGAAGATAACCCATCAAAAGATCAAAAAAACGATCTCTTATCAAGATCTATTGCAATAGCGGAATATTCCGAAGACTTTTTACGGGACATTGTGGTCAGTTTTTTAATTGCAGGGCGTGAAACAACATCTTCAGCTTTAACGTGGTTTTTTTGGATTGTGTCGTCCCGGCAAGACGTACAAAACAAGATAGTTAAAGAAGTTGAATCAATCCGTGCTCAAAATAAGAAAGAAGAAACACAAATGTTCGAGTTTGATGAGTTGAAGGAAATGCAATACTTGCACGCTGCGATTACAGAATCAATGAGATTGTACCCTCCAGTCCCACTTAACTTGACCGTATGTCTCAAAGATACTACGTTACCGGATGGAACTCAAGTTAAGAAAGGGGAGTACATGTCGTATCATTCATACGCGATGGGAAGAATGGAGAAGGTTTGGGGAAAAGACTGCAAAGAATACAAGCCAGAGAGATGGCTCGATGAAAATGGAATGTTTAGACCCGAAAGTCCATTCAAGTTTTTGGCATTTCACGCAGGGCCAAGAATGTGTTTGGGTAAAGACATGGCATATATTCAGATGAAGTCCATCGTGGCATCTGTGATGGAGAGGTTTCAGGTGGAAATGGTAGACAAGCACAAGTGTCCTGAAGAGAAGTTTTCGCTTACACTTAAGATAAAAGGAGGGCTACCTGTGTATGCTAAGTATAAATGA

Protein

Gene

>Asa6G05903.1
ATGGCTTTTCAATACCTAATACTACTTATTTCTTTATTGCTACTACCTATTTATATCCTAATAAAAAACAACAGGCCTCGCGATGACAATAGACCTTACCCAGTGCTTGGCCACCTCCCTCAGTTCCTTAAAAACCGGCACAGATCATTCGACTGGTTCACTGAACTCTTAAGTTCGTCTGACACAAACACCATCTTATTTTACCGCATGGGCAATACTCGATCTGTCATTACGGCAAACCCAGAAAATGTGGAACATGTGCTTAAATCTGATTTTGAGAATTTCCCGAAAGGTCCTAAAGTCCGCTTCACGCTTCATGATTTTCTTAGCAACGGCATCTTCAACTCTGATGGTGATCAATGGAAGACTCAAAGAAAAAATGCAAGCTATGAATTCAGTACAAAATCCCTGCGTAACTTTGTAGTTGAGACTGTGCAGAAAGAGACTTCAACCAGGCTTATTCCTCTCCTGGAGAAATATGCAAAGAATGAGCAGGCATTCGACATACAAAATGTGCTTGAAAGATACTCATTCGACACTATTTGTAAAGTTGCATTTGATGTAGACCCAGCTTGTTTAGTAGATGATGCCGTGAAATCTGATTTCGCCGATGCTTTTGGAGACGCTTCCAGTTACAGTGCTGGAAGGTTCAGGTATGCTATACCTGGATTATGGAGAATCAAGAAGTTACTGAACATCGGTTCAGAACGAAGACTGAAAGAATCCATTTCTACAGTGCACGATTTCGCAACAAGTATTATTCGTGAGCGGATGAAAGATGAAGATAACCCATCAAAAGATCAAAAAAACGATCTCTTATCAAGATCTATTGCAATAGCGGAATATTCCGAAGACTTTTTACGGGACATTGTGGTCAGTTTTTTAATTGCAGGGCGTGAAACAACATCTTCAGCTTTAACGTGGTTTTTTTGGATTGTGTCGTCCCGGCAAGACGTACAAAACAAGATAGTTAAAGAAGTTGAATCAATCCGTGctcaaaataagaaagaagaaacaCAAATGTTCGAGTTTGATGAGTTGAAGGAAATGCAATACTTGCACGCTGCGATTACAGAATCAATGAGATTGTACCCTCCAGTCCCACTTAACTTGACCGTATGTCTCAAAGATACTACGTTACCGGATGGAACTCAAGTTAAGAAAGGGGAGTACATGTCGTATCATTCATACGCGATGGGAAGAATGGAGAAGGTTTGGGGAAAAGACTGCAAAGAATACAAGCCAGAGAGATGGCTCGATGAAAATGGAATGTTTAGACCCGAAAGTCCATTCAAGTTTTTGGCATTTCACGCAGGGCCAAGAATGTGTTTGGGTAAAGACATGGCATATATTCAGATGAAGTCCATCGTGGCATCTGTGATGGAGAGGTTTCAGGTGGAAATGGTAGACAAGCACAAGTGTCCTGAAGAGAAGTTTTCGCTTACACTTAAGATAAAAGGAGGGCTACCTGTGTATGCTAAGTATAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008810187.1	7.5e-165	cytochrome P450 94A1-like
Swissprot	O81117.2	2.7e-111	P450-dependent fatty acid omega-hydroxylase
trEMBL	A0A6I9S8D3	5.4e-165	cytochrome P450 94B3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34540.1	55.84	1e-148	523	CYP94D1	cytochrome P450, family 94, subfamily D, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G05903	AT1G34540.1	462	198	5	31	489	32	490	55.84	1e-148	523
Asa6G05903	AT3G56630.1	473	209	4	22	491	23	493	54.76	6e-148	521
Asa6G05903	AT3G48520.1	508	271	7	1	496	1	499	42.52	5e-113	405

Ortholog group

Species	Genes
Allium cepa	g283592.t1; g421689.t1; g507063.t1; g507064.t1
Allium fistulosum	AfisC1G00341; AfisC2G04003; AfisC2G04004; AfisC6G03429
Allium sativum	Asa0G05439.1; Asa6G05903.1; Asa7G00732.1; Asa8G03546.1
Arabidopsis thaliana	AT1G34540.1; AT3G56630.1
Oryza sativa	LOC_Os01g58950.1; LOC_Os01g58960.1; LOC_Os01g58970.1; LOC_Os01g58990.1; LOC_Os01g59000.1; LOC_Os01g59020.1; LOC_Os01g59050.1; LOC_Os03g12260.1; LOC_Os11g04290.1; LOC_Os11g04310.1; LOC_Os12g04100.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	31	486	269.3	5.4e-80

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00517	CYP81F; indol-3-yl-methylglucosinolate hydroxylase	EC:1.14.-.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network